Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
MTHFRP42898 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
MTHFRP42898 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MTHFRP42898 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MTHFRP42898 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
MTHFRP42898 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MTHFRP42898 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
MTHFRP42898 FO393414.2-201ENST00000405153 598 ntBASIC16.9■□□□□ 0.3
MTHFRP42898 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MTHFRP42898 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.9■□□□□ 0.3
MTHFRP42898 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.9■□□□□ 0.3
MTHFRP42898 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MTHFRP42898 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.9■□□□□ 0.3
MTHFRP42898 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.9■□□□□ 0.3
MTHFRP42898 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
MTHFRP42898 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
MTHFRP42898 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MTHFRP42898 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
MTHFRP42898 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
MTHFRP42898 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MTHFRP42898 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MTHFRP42898 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.9■□□□□ 0.3
MTHFRP42898 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MTHFRP42898 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MTHFRP42898 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MTHFRP42898 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MTHFRP42898 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
MTHFRP42898 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
MTHFRP42898 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.9■□□□□ 0.3
MTHFRP42898 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
MTHFRP42898 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.3
MTHFRP42898 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
MTHFRP42898 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.89■□□□□ 0.3
MTHFRP42898 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.89■□□□□ 0.3
MTHFRP42898 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MTHFRP42898 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MTHFRP42898 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
MTHFRP42898 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
MTHFRP42898 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.89■□□□□ 0.29
MTHFRP42898 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
MTHFRP42898 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MTHFRP42898 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MTHFRP42898 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
MTHFRP42898 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MTHFRP42898 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MTHFRP42898 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.89■□□□□ 0.29
MTHFRP42898 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MTHFRP42898 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MTHFRP42898 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.89■□□□□ 0.29
MTHFRP42898 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.89■□□□□ 0.29
MTHFRP42898 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MTHFRP42898 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.89■□□□□ 0.29
MTHFRP42898 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.89■□□□□ 0.29
MTHFRP42898 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
MTHFRP42898 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.89■□□□□ 0.29
MTHFRP42898 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.89■□□□□ 0.29
MTHFRP42898 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.89■□□□□ 0.29
MTHFRP42898 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MTHFRP42898 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.89■□□□□ 0.29
MTHFRP42898 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.89■□□□□ 0.29
MTHFRP42898 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.89■□□□□ 0.29
MTHFRP42898 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.89■□□□□ 0.29
MTHFRP42898 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.89■□□□□ 0.29
MTHFRP42898 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.89■□□□□ 0.29
MTHFRP42898 AC025048.3-201ENST00000590609 569 ntBASIC16.89■□□□□ 0.29
MTHFRP42898 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.89■□□□□ 0.29
MTHFRP42898 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MTHFRP42898 AC005702.4-201ENST00000618393 416 ntBASIC16.89■□□□□ 0.29
MTHFRP42898 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.89■□□□□ 0.29
MTHFRP42898 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.89■□□□□ 0.29
MTHFRP42898 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
MTHFRP42898 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MTHFRP42898 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.89■□□□□ 0.29
MTHFRP42898 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.89■□□□□ 0.29
MTHFRP42898 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MTHFRP42898 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.89■□□□□ 0.29
MTHFRP42898 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MTHFRP42898 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MTHFRP42898 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MTHFRP42898 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
MTHFRP42898 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MTHFRP42898 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MTHFRP42898 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MTHFRP42898 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MTHFRP42898 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MTHFRP42898 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
MTHFRP42898 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
MTHFRP42898 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MTHFRP42898 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MTHFRP42898 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.88■□□□□ 0.29
MTHFRP42898 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
MTHFRP42898 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.88■□□□□ 0.29
MTHFRP42898 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MTHFRP42898 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
MTHFRP42898 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.88■□□□□ 0.29
MTHFRP42898 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MTHFRP42898 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MTHFRP42898 CDC14C-201ENST00000428251 1719 ntBASIC16.88■□□□□ 0.29
MTHFRP42898 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MTHFRP42898 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms