Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SNCAP37840 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.41□□□□□ -0.26
SNCAP37840 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNCAP37840 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.41□□□□□ -0.26
SNCAP37840 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNCAP37840 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.41□□□□□ -0.26
SNCAP37840 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.41□□□□□ -0.26
SNCAP37840 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SNCAP37840 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNCAP37840 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNCAP37840 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SNCAP37840 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.41□□□□□ -0.26
SNCAP37840 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNCAP37840 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNCAP37840 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.41□□□□□ -0.26
SNCAP37840 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNCAP37840 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNCAP37840 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.41□□□□□ -0.26
SNCAP37840 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SNCAP37840 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNCAP37840 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNCAP37840 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SNCAP37840 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SNCAP37840 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.41□□□□□ -0.26
SNCAP37840 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNCAP37840 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.41□□□□□ -0.26
SNCAP37840 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.41□□□□□ -0.26
SNCAP37840 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.41□□□□□ -0.26
SNCAP37840 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.41□□□□□ -0.26
SNCAP37840 AC013467.2-201ENST00000605472 835 ntBASIC13.41□□□□□ -0.26
SNCAP37840 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.41□□□□□ -0.26
SNCAP37840 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNCAP37840 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNCAP37840 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNCAP37840 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.41□□□□□ -0.26
SNCAP37840 AC006277.1-201ENST00000624348 1610 ntBASIC13.41□□□□□ -0.26
SNCAP37840 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNCAP37840 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNCAP37840 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNCAP37840 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNCAP37840 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SNCAP37840 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.41□□□□□ -0.26
SNCAP37840 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SNCAP37840 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNCAP37840 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.41□□□□□ -0.26
SNCAP37840 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.41□□□□□ -0.26
SNCAP37840 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.41□□□□□ -0.26
SNCAP37840 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.41□□□□□ -0.26
SNCAP37840 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNCAP37840 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.41□□□□□ -0.26
SNCAP37840 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.41□□□□□ -0.26
SNCAP37840 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNCAP37840 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNCAP37840 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.4□□□□□ -0.26
SNCAP37840 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.4□□□□□ -0.26
SNCAP37840 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.4□□□□□ -0.26
SNCAP37840 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SNCAP37840 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SNCAP37840 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNCAP37840 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNCAP37840 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNCAP37840 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNCAP37840 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SNCAP37840 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNCAP37840 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNCAP37840 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNCAP37840 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNCAP37840 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNCAP37840 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNCAP37840 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
SNCAP37840 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNCAP37840 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNCAP37840 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.4□□□□□ -0.26
SNCAP37840 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SNCAP37840 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNCAP37840 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.4□□□□□ -0.26
SNCAP37840 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNCAP37840 PRYP5-201ENST00000451909 266 ntBASIC13.4□□□□□ -0.26
SNCAP37840 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.4□□□□□ -0.26
SNCAP37840 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNCAP37840 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.4□□□□□ -0.26
SNCAP37840 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.4□□□□□ -0.26
SNCAP37840 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.4□□□□□ -0.26
SNCAP37840 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNCAP37840 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SNCAP37840 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNCAP37840 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNCAP37840 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNCAP37840 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.4□□□□□ -0.26
SNCAP37840 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
SNCAP37840 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNCAP37840 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.4□□□□□ -0.26
SNCAP37840 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.4□□□□□ -0.26
SNCAP37840 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.4□□□□□ -0.26
SNCAP37840 AC106881.1-201ENST00000605849 3329 ntBASIC13.4□□□□□ -0.26
SNCAP37840 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNCAP37840 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SNCAP37840 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
SNCAP37840 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SNCAP37840 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms