Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT2P35908 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT2P35908 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
KRT2P35908 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT2P35908 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT2P35908 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT2P35908 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT2P35908 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KRT2P35908 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KRT2P35908 AC004967.1-201ENST00000453589 447 ntBASIC18.56■□□□□ 0.56
KRT2P35908 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.56■□□□□ 0.56
KRT2P35908 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT2P35908 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
KRT2P35908 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
KRT2P35908 AC023511.2-201ENST00000618803 211 ntBASIC18.56■□□□□ 0.56
KRT2P35908 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.56■□□□□ 0.56
KRT2P35908 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
KRT2P35908 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT2P35908 AP001282.1-201ENST00000531301 1499 ntBASIC18.56■□□□□ 0.56
KRT2P35908 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT2P35908 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KRT2P35908 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT2P35908 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
KRT2P35908 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT2P35908 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.56■□□□□ 0.56
KRT2P35908 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KRT2P35908 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
KRT2P35908 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.56■□□□□ 0.56
KRT2P35908 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KRT2P35908 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.55■□□□□ 0.56
KRT2P35908 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT2P35908 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT2P35908 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT2P35908 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.55■□□□□ 0.56
KRT2P35908 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT2P35908 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT2P35908 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.55■□□□□ 0.56
KRT2P35908 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.55■□□□□ 0.56
KRT2P35908 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT2P35908 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
KRT2P35908 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KRT2P35908 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
KRT2P35908 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT2P35908 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
KRT2P35908 MIR1233-2-201ENST00000408138 82 ntBASIC18.55■□□□□ 0.56
KRT2P35908 MIR1233-1-201ENST00000408722 82 ntBASIC18.55■□□□□ 0.56
KRT2P35908 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KRT2P35908 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KRT2P35908 AC023141.5-201ENST00000458585 616 ntBASIC18.55■□□□□ 0.56
KRT2P35908 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.55■□□□□ 0.56
KRT2P35908 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT2P35908 ALG1L8P-201ENST00000533887 760 ntBASIC18.55■□□□□ 0.56
KRT2P35908 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.55■□□□□ 0.56
KRT2P35908 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.55■□□□□ 0.56
KRT2P35908 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.55■□□□□ 0.56
KRT2P35908 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KRT2P35908 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KRT2P35908 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT2P35908 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT2P35908 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.55■□□□□ 0.56
KRT2P35908 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.55■□□□□ 0.56
KRT2P35908 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT2P35908 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.55■□□□□ 0.56
KRT2P35908 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT2P35908 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT2P35908 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.54■□□□□ 0.56
KRT2P35908 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
KRT2P35908 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT2P35908 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT2P35908 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT2P35908 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.54■□□□□ 0.56
KRT2P35908 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT2P35908 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT2P35908 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT2P35908 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
KRT2P35908 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KRT2P35908 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT2P35908 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT2P35908 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT2P35908 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
KRT2P35908 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT2P35908 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KRT2P35908 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.54■□□□□ 0.56
KRT2P35908 CNN2P11-201ENST00000429351 262 ntBASIC18.54■□□□□ 0.56
KRT2P35908 GPS2P2-201ENST00000430745 888 ntBASIC18.54■□□□□ 0.56
KRT2P35908 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.54■□□□□ 0.56
KRT2P35908 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
KRT2P35908 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.54■□□□□ 0.56
KRT2P35908 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
KRT2P35908 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
KRT2P35908 AC009093.7-201ENST00000623853 1223 ntBASIC18.54■□□□□ 0.56
KRT2P35908 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KRT2P35908 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
KRT2P35908 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT2P35908 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.54■□□□□ 0.56
KRT2P35908 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KRT2P35908 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
KRT2P35908 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT2P35908 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT2P35908 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms