Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNGA1P29973 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
CNGA1P29973 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CNGA1P29973 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
CNGA1P29973 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
CNGA1P29973 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CNGA1P29973 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
CNGA1P29973 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CNGA1P29973 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNGA1P29973 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNGA1P29973 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNGA1P29973 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNGA1P29973 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNGA1P29973 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNGA1P29973 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.39■□□□□ 0.53
CNGA1P29973 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.39■□□□□ 0.53
CNGA1P29973 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.39■□□□□ 0.53
CNGA1P29973 AGGF1P2-201ENST00000426656 2106 ntBASIC18.39■□□□□ 0.53
CNGA1P29973 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.39■□□□□ 0.53
CNGA1P29973 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNGA1P29973 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.39■□□□□ 0.53
CNGA1P29973 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.39■□□□□ 0.53
CNGA1P29973 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNGA1P29973 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.39■□□□□ 0.53
CNGA1P29973 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.39■□□□□ 0.53
CNGA1P29973 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.39■□□□□ 0.53
CNGA1P29973 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNGA1P29973 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNGA1P29973 AL603756.1-201ENST00000606511 2163 ntBASIC18.39■□□□□ 0.53
CNGA1P29973 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNGA1P29973 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
CNGA1P29973 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CNGA1P29973 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CNGA1P29973 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNGA1P29973 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNGA1P29973 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNGA1P29973 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNGA1P29973 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.39■□□□□ 0.53
CNGA1P29973 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.39■□□□□ 0.53
CNGA1P29973 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNGA1P29973 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNGA1P29973 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNGA1P29973 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CNGA1P29973 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNGA1P29973 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNGA1P29973 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
CNGA1P29973 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CNGA1P29973 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CNGA1P29973 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CNGA1P29973 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNGA1P29973 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNGA1P29973 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNGA1P29973 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNGA1P29973 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
CNGA1P29973 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNGA1P29973 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNGA1P29973 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.38■□□□□ 0.53
CNGA1P29973 AC245100.3-201ENST00000441281 285 ntBASIC18.38■□□□□ 0.53
CNGA1P29973 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.38■□□□□ 0.53
CNGA1P29973 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.38■□□□□ 0.53
CNGA1P29973 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.38■□□□□ 0.53
CNGA1P29973 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.38■□□□□ 0.53
CNGA1P29973 AC133552.6-201ENST00000613406 534 ntBASIC18.38■□□□□ 0.53
CNGA1P29973 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.38■□□□□ 0.53
CNGA1P29973 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNGA1P29973 NKILA-202ENST00000614771 2598 ntBASIC18.38■□□□□ 0.53
CNGA1P29973 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNGA1P29973 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNGA1P29973 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNGA1P29973 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNGA1P29973 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNGA1P29973 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
CNGA1P29973 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.38■□□□□ 0.53
CNGA1P29973 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CNGA1P29973 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNGA1P29973 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNGA1P29973 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CNGA1P29973 SNX33P1-201ENST00000592116 1762 ntBASIC18.37■□□□□ 0.53
CNGA1P29973 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNGA1P29973 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CNGA1P29973 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CNGA1P29973 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CNGA1P29973 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNGA1P29973 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.37■□□□□ 0.53
CNGA1P29973 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNGA1P29973 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.37■□□□□ 0.53
CNGA1P29973 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNGA1P29973 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CNGA1P29973 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNGA1P29973 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.37■□□□□ 0.53
CNGA1P29973 AC098850.1-201ENST00000419919 790 ntBASIC18.37■□□□□ 0.53
CNGA1P29973 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.37■□□□□ 0.53
CNGA1P29973 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.37■□□□□ 0.53
CNGA1P29973 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNGA1P29973 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.37■□□□□ 0.53
CNGA1P29973 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.37■□□□□ 0.53
CNGA1P29973 AC093726.1-201ENST00000608064 963 ntBASIC18.37■□□□□ 0.53
CNGA1P29973 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.37■□□□□ 0.53
CNGA1P29973 AL139011.1-202ENST00000642063 584 ntBASIC18.37■□□□□ 0.53
CNGA1P29973 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms