Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATP6V0CP27449 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATP6V0CP27449 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.02□□□□□ -0.33
ATP6V0CP27449 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATP6V0CP27449 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATP6V0CP27449 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATP6V0CP27449 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.02□□□□□ -0.33
ATP6V0CP27449 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATP6V0CP27449 AC105250.1-201ENST00000509378 2057 ntBASIC13.01□□□□□ -0.33
ATP6V0CP27449 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.01□□□□□ -0.33
ATP6V0CP27449 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP6V0CP27449 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP6V0CP27449 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.01□□□□□ -0.33
ATP6V0CP27449 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP6V0CP27449 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP6V0CP27449 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP6V0CP27449 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ATP6V0CP27449 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP6V0CP27449 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.01□□□□□ -0.33
ATP6V0CP27449 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.01□□□□□ -0.33
ATP6V0CP27449 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATP6V0CP27449 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.01□□□□□ -0.33
ATP6V0CP27449 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP6V0CP27449 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.01□□□□□ -0.33
ATP6V0CP27449 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ATP6V0CP27449 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP6V0CP27449 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP6V0CP27449 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATP6V0CP27449 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP6V0CP27449 AC131009.4-201ENST00000624048 1740 ntBASIC13.01□□□□□ -0.33
ATP6V0CP27449 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP6V0CP27449 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP6V0CP27449 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.01□□□□□ -0.33
ATP6V0CP27449 AC112693.3-201ENST00000624819 1983 ntBASIC13.01□□□□□ -0.33
ATP6V0CP27449 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP6V0CP27449 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
ATP6V0CP27449 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP6V0CP27449 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATP6V0CP27449 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ATP6V0CP27449 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
ATP6V0CP27449 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.01□□□□□ -0.33
ATP6V0CP27449 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP6V0CP27449 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ATP6V0CP27449 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ATP6V0CP27449 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP6V0CP27449 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATP6V0CP27449 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP6V0CP27449 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13□□□□□ -0.33
ATP6V0CP27449 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ATP6V0CP27449 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13□□□□□ -0.33
ATP6V0CP27449 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ATP6V0CP27449 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 AGAP7P-201ENST00000582299 2062 ntBASIC13□□□□□ -0.33
ATP6V0CP27449 AGAP14-201ENST00000624701 2060 ntBASIC13□□□□□ -0.33
ATP6V0CP27449 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13□□□□□ -0.33
ATP6V0CP27449 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13□□□□□ -0.33
ATP6V0CP27449 AC005622.1-201ENST00000636801 1703 ntBASIC13□□□□□ -0.33
ATP6V0CP27449 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13□□□□□ -0.33
ATP6V0CP27449 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 KRT18P22-201ENST00000402024 1347 ntBASIC13□□□□□ -0.33
ATP6V0CP27449 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13□□□□□ -0.33
ATP6V0CP27449 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
ATP6V0CP27449 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
ATP6V0CP27449 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13□□□□□ -0.33
ATP6V0CP27449 SPDYE21P-201ENST00000413323 827 ntBASIC13□□□□□ -0.33
ATP6V0CP27449 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13□□□□□ -0.33
ATP6V0CP27449 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13□□□□□ -0.33
ATP6V0CP27449 LINC01238-205ENST00000567549 1107 ntBASIC13□□□□□ -0.33
ATP6V0CP27449 AC011558.1-201ENST00000623459 338 ntBASIC13□□□□□ -0.33
ATP6V0CP27449 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 C18orf15-201ENST00000623680 2534 ntBASIC13□□□□□ -0.33
ATP6V0CP27449 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ATP6V0CP27449 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ATP6V0CP27449 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ATP6V0CP27449 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms