Protein–RNA interactions for Protein: P24046

GABRR1, Gamma-aminobutyric acid receptor subunit rho-1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRR1P24046 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRR1P24046 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.03□□□□□ -0.16
GABRR1P24046 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABRR1P24046 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABRR1P24046 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.03□□□□□ -0.16
GABRR1P24046 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRR1P24046 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRR1P24046 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRR1P24046 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
GABRR1P24046 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.03□□□□□ -0.16
GABRR1P24046 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
GABRR1P24046 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABRR1P24046 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRR1P24046 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.03□□□□□ -0.16
GABRR1P24046 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.03□□□□□ -0.16
GABRR1P24046 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRR1P24046 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABRR1P24046 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABRR1P24046 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
GABRR1P24046 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABRR1P24046 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.02□□□□□ -0.16
GABRR1P24046 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GABRR1P24046 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABRR1P24046 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.02□□□□□ -0.16
GABRR1P24046 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABRR1P24046 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
GABRR1P24046 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.02□□□□□ -0.16
GABRR1P24046 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GABRR1P24046 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABRR1P24046 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
GABRR1P24046 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
GABRR1P24046 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABRR1P24046 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
GABRR1P24046 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
GABRR1P24046 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABRR1P24046 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.02□□□□□ -0.16
GABRR1P24046 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GABRR1P24046 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABRR1P24046 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.02□□□□□ -0.16
GABRR1P24046 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.02□□□□□ -0.16
GABRR1P24046 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABRR1P24046 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABRR1P24046 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABRR1P24046 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GABRR1P24046 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.02□□□□□ -0.17
GABRR1P24046 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABRR1P24046 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
GABRR1P24046 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.02□□□□□ -0.17
GABRR1P24046 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.02□□□□□ -0.17
GABRR1P24046 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
GABRR1P24046 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.02□□□□□ -0.17
GABRR1P24046 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.02□□□□□ -0.17
GABRR1P24046 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.02□□□□□ -0.17
GABRR1P24046 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
GABRR1P24046 AC020765.3-201ENST00000613051 740 ntBASIC14.02□□□□□ -0.17
GABRR1P24046 AC010654.1-201ENST00000615722 808 ntBASIC14.02□□□□□ -0.17
GABRR1P24046 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
GABRR1P24046 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.02□□□□□ -0.17
GABRR1P24046 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABRR1P24046 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
GABRR1P24046 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABRR1P24046 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABRR1P24046 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABRR1P24046 LINC02447-202ENST00000501888 2146 ntBASIC14.02□□□□□ -0.17
GABRR1P24046 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABRR1P24046 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABRR1P24046 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.02□□□□□ -0.17
GABRR1P24046 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GABRR1P24046 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
GABRR1P24046 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.01□□□□□ -0.17
GABRR1P24046 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABRR1P24046 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABRR1P24046 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.01□□□□□ -0.17
GABRR1P24046 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
GABRR1P24046 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GABRR1P24046 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.01□□□□□ -0.17
GABRR1P24046 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.01□□□□□ -0.17
GABRR1P24046 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABRR1P24046 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GABRR1P24046 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABRR1P24046 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.01□□□□□ -0.17
GABRR1P24046 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABRR1P24046 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.01□□□□□ -0.17
GABRR1P24046 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.01□□□□□ -0.17
GABRR1P24046 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.01□□□□□ -0.17
GABRR1P24046 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.01□□□□□ -0.17
GABRR1P24046 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GABRR1P24046 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.01□□□□□ -0.17
GABRR1P24046 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.01□□□□□ -0.17
GABRR1P24046 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.01□□□□□ -0.17
GABRR1P24046 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
GABRR1P24046 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
GABRR1P24046 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.01□□□□□ -0.17
GABRR1P24046 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GABRR1P24046 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.01□□□□□ -0.17
GABRR1P24046 AC116407.3-201ENST00000623905 1129 ntBASIC14.01□□□□□ -0.17
GABRR1P24046 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GABRR1P24046 PCDHA3-202ENST00000532566 4594 ntBASIC14.01□□□□□ -0.17
GABRR1P24046 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
GABRR1P24046 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms