Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.66■□□□□ 0.42
RFX1P22670 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.66■□□□□ 0.42
RFX1P22670 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX1P22670 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX1P22670 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.66■□□□□ 0.42
RFX1P22670 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX1P22670 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFX1P22670 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.66■□□□□ 0.42
RFX1P22670 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX1P22670 AL592309.1-201ENST00000443127 649 ntBASIC17.66■□□□□ 0.42
RFX1P22670 AC245100.5-201ENST00000452108 331 ntBASIC17.66■□□□□ 0.42
RFX1P22670 AC125807.1-201ENST00000483097 614 ntBASIC17.66■□□□□ 0.42
RFX1P22670 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.66■□□□□ 0.42
RFX1P22670 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX1P22670 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX1P22670 AC015911.4-201ENST00000588022 1070 ntBASIC17.66■□□□□ 0.42
RFX1P22670 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.66■□□□□ 0.42
RFX1P22670 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RFX1P22670 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.66■□□□□ 0.42
RFX1P22670 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.66■□□□□ 0.42
RFX1P22670 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RFX1P22670 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.66■□□□□ 0.42
RFX1P22670 AC007950.2-201ENST00000615045 2347 ntBASIC17.66■□□□□ 0.42
RFX1P22670 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX1P22670 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.66■□□□□ 0.42
RFX1P22670 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.66■□□□□ 0.42
RFX1P22670 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFX1P22670 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFX1P22670 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.66■□□□□ 0.42
RFX1P22670 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.66■□□□□ 0.42
RFX1P22670 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.66■□□□□ 0.42
RFX1P22670 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX1P22670 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX1P22670 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX1P22670 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.65■□□□□ 0.42
RFX1P22670 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX1P22670 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RFX1P22670 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX1P22670 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RFX1P22670 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.65■□□□□ 0.42
RFX1P22670 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.65■□□□□ 0.42
RFX1P22670 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.65■□□□□ 0.42
RFX1P22670 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.65■□□□□ 0.42
RFX1P22670 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX1P22670 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX1P22670 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX1P22670 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX1P22670 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.65■□□□□ 0.42
RFX1P22670 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.65■□□□□ 0.42
RFX1P22670 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
RFX1P22670 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFX1P22670 AC055876.3-201ENST00000431496 288 ntBASIC17.65■□□□□ 0.42
RFX1P22670 AC002472.2-201ENST00000442739 958 ntBASIC17.65■□□□□ 0.42
RFX1P22670 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX1P22670 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFX1P22670 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RFX1P22670 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.65■□□□□ 0.42
RFX1P22670 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX1P22670 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFX1P22670 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.65■□□□□ 0.42
RFX1P22670 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.65■□□□□ 0.42
RFX1P22670 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.65■□□□□ 0.42
RFX1P22670 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.65■□□□□ 0.42
RFX1P22670 AL390955.2-201ENST00000603032 514 ntBASIC17.65■□□□□ 0.42
RFX1P22670 AL365330.1-201ENST00000607459 531 ntBASIC17.65■□□□□ 0.42
RFX1P22670 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RFX1P22670 AC138649.4-201ENST00000612222 287 ntBASIC17.65■□□□□ 0.42
RFX1P22670 AL161645.1-201ENST00000622716 1255 ntBASIC17.65■□□□□ 0.42
RFX1P22670 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.65■□□□□ 0.42
RFX1P22670 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RFX1P22670 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.65■□□□□ 0.42
RFX1P22670 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.65■□□□□ 0.42
RFX1P22670 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX1P22670 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX1P22670 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.65■□□□□ 0.42
RFX1P22670 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.65■□□□□ 0.42
RFX1P22670 TUBB3P1-201ENST00000405796 1332 ntBASIC17.65■□□□□ 0.42
RFX1P22670 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RFX1P22670 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFX1P22670 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX1P22670 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX1P22670 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
RFX1P22670 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RFX1P22670 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RFX1P22670 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RFX1P22670 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RFX1P22670 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RFX1P22670 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RFX1P22670 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RFX1P22670 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.64■□□□□ 0.42
RFX1P22670 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX1P22670 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX1P22670 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX1P22670 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFX1P22670 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
RFX1P22670 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX1P22670 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX1P22670 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX1P22670 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX1P22670 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms