Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL1P22362 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL1P22362 AC243562.2-201ENST00000561247 970 ntBASIC13.93□□□□□ -0.18
CCL1P22362 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.93□□□□□ -0.18
CCL1P22362 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.93□□□□□ -0.18
CCL1P22362 AL138918.1-201ENST00000568306 659 ntBASIC13.93□□□□□ -0.18
CCL1P22362 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.93□□□□□ -0.18
CCL1P22362 SPTSSB-204ENST00000617024 1292 ntBASIC13.93□□□□□ -0.18
CCL1P22362 AL513190.1-201ENST00000621254 727 ntBASIC13.93□□□□□ -0.18
CCL1P22362 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 AC006058.4-201ENST00000624016 1670 ntBASIC13.93□□□□□ -0.18
CCL1P22362 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
CCL1P22362 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL1P22362 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CCL1P22362 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL1P22362 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL1P22362 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL1P22362 IL9RP2-201ENST00000423948 1312 ntBASIC13.92□□□□□ -0.18
CCL1P22362 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CCL1P22362 AC092850.2-201ENST00000623821 2697 ntBASIC13.92□□□□□ -0.18
CCL1P22362 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL1P22362 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.92□□□□□ -0.18
CCL1P22362 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL1P22362 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL1P22362 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL1P22362 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL1P22362 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL1P22362 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL1P22362 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CCL1P22362 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
CCL1P22362 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL1P22362 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL1P22362 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL1P22362 AL591424.1-201ENST00000442569 1213 ntBASIC13.92□□□□□ -0.18
CCL1P22362 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CCL1P22362 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.92□□□□□ -0.18
CCL1P22362 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.92□□□□□ -0.18
CCL1P22362 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.92□□□□□ -0.18
CCL1P22362 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL1P22362 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.92□□□□□ -0.18
CCL1P22362 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.92□□□□□ -0.18
CCL1P22362 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL1P22362 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL1P22362 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL1P22362 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL1P22362 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL1P22362 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.92□□□□□ -0.18
CCL1P22362 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL1P22362 AC136621.1-201ENST00000624017 2304 ntBASIC13.92□□□□□ -0.18
CCL1P22362 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CCL1P22362 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL1P22362 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL1P22362 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL1P22362 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.92□□□□□ -0.18
CCL1P22362 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL1P22362 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL1P22362 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CCL1P22362 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.91□□□□□ -0.18
CCL1P22362 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CCL1P22362 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL1P22362 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.91□□□□□ -0.18
CCL1P22362 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CCL1P22362 AL691432.1-201ENST00000596308 1422 ntBASIC13.91□□□□□ -0.18
CCL1P22362 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.91□□□□□ -0.18
CCL1P22362 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCL1P22362 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.91□□□□□ -0.18
CCL1P22362 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.91□□□□□ -0.18
CCL1P22362 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
CCL1P22362 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CCL1P22362 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.91□□□□□ -0.18
CCL1P22362 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL1P22362 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCL1P22362 AC105250.1-201ENST00000509378 2057 ntBASIC13.91□□□□□ -0.18
CCL1P22362 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL1P22362 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.91□□□□□ -0.18
CCL1P22362 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CCL1P22362 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCL1P22362 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CCL1P22362 RNA5SP416-201ENST00000516838 111 ntBASIC13.91□□□□□ -0.18
CCL1P22362 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.91□□□□□ -0.18
CCL1P22362 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.91□□□□□ -0.18
CCL1P22362 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms