Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC138932.2-201ENST00000548268 1459 ntBASIC18.75■□□□□ 0.59
ERCC3P19447 AC126755.4-201ENST00000549796 1459 ntBASIC18.75■□□□□ 0.59
ERCC3P19447 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ERCC3P19447 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.75■□□□□ 0.59
ERCC3P19447 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC3P19447 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC3P19447 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC3P19447 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
ERCC3P19447 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC3P19447 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC3P19447 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC3P19447 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
ERCC3P19447 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.74■□□□□ 0.59
ERCC3P19447 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC3P19447 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC3P19447 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC3P19447 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC3P19447 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC3P19447 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC3P19447 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.74■□□□□ 0.59
ERCC3P19447 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.74■□□□□ 0.59
ERCC3P19447 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC3P19447 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
ERCC3P19447 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC3P19447 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.74■□□□□ 0.59
ERCC3P19447 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.74■□□□□ 0.59
ERCC3P19447 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ERCC3P19447 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC3P19447 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC3P19447 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ERCC3P19447 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC3P19447 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC3P19447 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
ERCC3P19447 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.74■□□□□ 0.59
ERCC3P19447 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC3P19447 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ERCC3P19447 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.74■□□□□ 0.59
ERCC3P19447 DFFBP1-201ENST00000433250 979 ntBASIC18.74■□□□□ 0.59
ERCC3P19447 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.74■□□□□ 0.59
ERCC3P19447 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC3P19447 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.74■□□□□ 0.59
ERCC3P19447 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.74■□□□□ 0.59
ERCC3P19447 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC3P19447 AC061975.2-201ENST00000581722 295 ntBASIC18.74■□□□□ 0.59
ERCC3P19447 AC024267.1-201ENST00000582320 895 ntBASIC18.74■□□□□ 0.59
ERCC3P19447 AL359881.2-201ENST00000602973 570 ntBASIC18.74■□□□□ 0.59
ERCC3P19447 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ERCC3P19447 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC3P19447 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC3P19447 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ERCC3P19447 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.74■□□□□ 0.59
ERCC3P19447 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC3P19447 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
ERCC3P19447 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC3P19447 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.74■□□□□ 0.59
ERCC3P19447 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC3P19447 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.74■□□□□ 0.59
ERCC3P19447 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC3P19447 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ERCC3P19447 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ERCC3P19447 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC3P19447 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC3P19447 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ERCC3P19447 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC3P19447 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC3P19447 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC3P19447 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.73■□□□□ 0.59
ERCC3P19447 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC3P19447 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
ERCC3P19447 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ERCC3P19447 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC3P19447 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.73■□□□□ 0.59
ERCC3P19447 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.73■□□□□ 0.59
ERCC3P19447 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC3P19447 AC008741.2-201ENST00000612792 3115 ntBASIC18.73■□□□□ 0.59
ERCC3P19447 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC3P19447 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC3P19447 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC3P19447 SPDYE19P-201ENST00000338590 713 ntBASIC18.73■□□□□ 0.59
ERCC3P19447 DGCR5-201ENST00000399539 862 ntBASIC18.73■□□□□ 0.59
ERCC3P19447 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
ERCC3P19447 U91328.1-201ENST00000437528 223 ntBASIC18.73■□□□□ 0.59
ERCC3P19447 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.73■□□□□ 0.59
ERCC3P19447 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.73■□□□□ 0.59
ERCC3P19447 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.73■□□□□ 0.59
ERCC3P19447 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC3P19447 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
ERCC3P19447 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.73■□□□□ 0.59
ERCC3P19447 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC3P19447 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC3P19447 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.73■□□□□ 0.59
ERCC3P19447 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.73■□□□□ 0.59
ERCC3P19447 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC3P19447 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.73■□□□□ 0.59
ERCC3P19447 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC3P19447 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ERCC3P19447 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ERCC3P19447 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.72■□□□□ 0.59
ERCC3P19447 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC3P19447 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms