Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD53P19397 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CD53P19397 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CD53P19397 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.79□□□□□ -0.04
CD53P19397 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD53P19397 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CD53P19397 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD53P19397 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD53P19397 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD53P19397 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD53P19397 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD53P19397 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.79□□□□□ -0.04
CD53P19397 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CD53P19397 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD53P19397 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD53P19397 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD53P19397 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD53P19397 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CD53P19397 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.79□□□□□ -0.04
CD53P19397 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.79□□□□□ -0.04
CD53P19397 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD53P19397 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD53P19397 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.79□□□□□ -0.04
CD53P19397 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CD53P19397 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.79□□□□□ -0.04
CD53P19397 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.79□□□□□ -0.04
CD53P19397 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD53P19397 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.79□□□□□ -0.04
CD53P19397 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CD53P19397 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD53P19397 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.79□□□□□ -0.04
CD53P19397 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD53P19397 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.79□□□□□ -0.04
CD53P19397 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD53P19397 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD53P19397 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD53P19397 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD53P19397 AC093512.1-201ENST00000617969 520 ntBASIC14.79□□□□□ -0.04
CD53P19397 AC092902.6-201ENST00000641783 218 ntBASIC14.79□□□□□ -0.04
CD53P19397 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD53P19397 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD53P19397 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CD53P19397 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD53P19397 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD53P19397 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD53P19397 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD53P19397 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.78□□□□□ -0.04
CD53P19397 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
CD53P19397 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
CD53P19397 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CD53P19397 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD53P19397 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD53P19397 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.78□□□□□ -0.04
CD53P19397 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD53P19397 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD53P19397 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD53P19397 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD53P19397 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.78□□□□□ -0.04
CD53P19397 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.78□□□□□ -0.04
CD53P19397 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CD53P19397 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD53P19397 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.78□□□□□ -0.04
CD53P19397 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD53P19397 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.78□□□□□ -0.04
CD53P19397 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.78□□□□□ -0.04
CD53P19397 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CD53P19397 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD53P19397 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD53P19397 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.78□□□□□ -0.04
CD53P19397 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD53P19397 AC004461.1-201ENST00000412461 403 ntBASIC14.78□□□□□ -0.04
CD53P19397 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.78□□□□□ -0.04
CD53P19397 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD53P19397 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.78□□□□□ -0.04
CD53P19397 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.78□□□□□ -0.04
CD53P19397 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.78□□□□□ -0.04
CD53P19397 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.78□□□□□ -0.04
CD53P19397 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.78□□□□□ -0.04
CD53P19397 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD53P19397 AC239800.4-201ENST00000603712 296 ntBASIC14.78□□□□□ -0.04
CD53P19397 AC105339.1-204ENST00000636249 355 ntBASIC14.78□□□□□ -0.04
CD53P19397 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD53P19397 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD53P19397 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
CD53P19397 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.78□□□□□ -0.04
CD53P19397 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.78□□□□□ -0.04
CD53P19397 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD53P19397 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD53P19397 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD53P19397 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.78□□□□□ -0.04
CD53P19397 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.78□□□□□ -0.04
CD53P19397 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD53P19397 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.78□□□□□ -0.04
CD53P19397 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CD53P19397 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.78□□□□□ -0.04
CD53P19397 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
CD53P19397 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.78□□□□□ -0.04
CD53P19397 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CD53P19397 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD53P19397 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms