Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATF3P18847 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATF3P18847 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATF3P18847 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATF3P18847 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ATF3P18847 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ATF3P18847 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC21.93■■□□□ 1.1
ATF3P18847 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
ATF3P18847 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
ATF3P18847 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATF3P18847 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC21.93■■□□□ 1.1
ATF3P18847 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ATF3P18847 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC21.93■■□□□ 1.1
ATF3P18847 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC21.93■■□□□ 1.1
ATF3P18847 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC21.93■■□□□ 1.1
ATF3P18847 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ATF3P18847 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.93■■□□□ 1.1
ATF3P18847 AMT-206ENST00000458307 1860 ntTSL 2 BASIC21.93■■□□□ 1.1
ATF3P18847 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC21.93■■□□□ 1.1
ATF3P18847 TSACC-208ENST00000481479 741 ntTSL 2 BASIC21.93■■□□□ 1.1
ATF3P18847 AP001582.1-201ENST00000525856 295 ntBASIC21.93■■□□□ 1.1
ATF3P18847 MBP-227ENST00000526111 581 ntTSL 4 BASIC21.93■■□□□ 1.1
ATF3P18847 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.93■■□□□ 1.1
ATF3P18847 BNIP3P1-202ENST00000550043 1585 ntBASIC21.93■■□□□ 1.1
ATF3P18847 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC21.93■■□□□ 1.1
ATF3P18847 MIR5572-201ENST00000583188 137 ntBASIC21.93■■□□□ 1.1
ATF3P18847 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC21.93■■□□□ 1.1
ATF3P18847 AC132938.4-201ENST00000623835 848 ntBASIC21.93■■□□□ 1.1
ATF3P18847 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC21.93■■□□□ 1.1
ATF3P18847 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATF3P18847 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.92■■□□□ 1.1
ATF3P18847 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATF3P18847 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATF3P18847 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC21.92■■□□□ 1.1
ATF3P18847 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC21.92■■□□□ 1.1
ATF3P18847 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC21.92■■□□□ 1.1
ATF3P18847 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC21.92■■□□□ 1.1
ATF3P18847 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATF3P18847 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATF3P18847 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
ATF3P18847 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ATF3P18847 PGGT1BP2-201ENST00000398621 1028 ntBASIC21.92■■□□□ 1.1
ATF3P18847 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC21.92■■□□□ 1.1
ATF3P18847 IMP3P2-201ENST00000489760 475 ntBASIC21.92■■□□□ 1.1
ATF3P18847 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC21.92■■□□□ 1.1
ATF3P18847 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC21.92■■□□□ 1.1
ATF3P18847 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC21.92■■□□□ 1.1
ATF3P18847 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC21.92■■□□□ 1.1
ATF3P18847 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC21.92■■□□□ 1.1
ATF3P18847 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC21.92■■□□□ 1.1
ATF3P18847 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATF3P18847 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATF3P18847 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC21.92■■□□□ 1.1
ATF3P18847 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ATF3P18847 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATF3P18847 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC21.92■■□□□ 1.1
ATF3P18847 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
ATF3P18847 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATF3P18847 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATF3P18847 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATF3P18847 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC21.91■■□□□ 1.1
ATF3P18847 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC21.91■■□□□ 1.1
ATF3P18847 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC21.91■■□□□ 1.1
ATF3P18847 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATF3P18847 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATF3P18847 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATF3P18847 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
ATF3P18847 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATF3P18847 AC091046.1-201ENST00000331871 207 ntBASIC21.91■■□□□ 1.1
ATF3P18847 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
ATF3P18847 AC245100.5-201ENST00000452108 331 ntBASIC21.91■■□□□ 1.1
ATF3P18847 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC21.91■■□□□ 1.1
ATF3P18847 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC21.91■■□□□ 1.1
ATF3P18847 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC21.91■■□□□ 1.1
ATF3P18847 CYGB-203ENST00000589145 788 ntTSL 3 BASIC21.91■■□□□ 1.1
ATF3P18847 AC145423.3-201ENST00000615987 467 ntBASIC21.91■■□□□ 1.1
ATF3P18847 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC21.91■■□□□ 1.1
ATF3P18847 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATF3P18847 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.91■■□□□ 1.1
ATF3P18847 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATF3P18847 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.91■■□□□ 1.1
ATF3P18847 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATF3P18847 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
ATF3P18847 AC018735.1-201ENST00000437208 1502 ntBASIC21.9■■□□□ 1.1
ATF3P18847 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC21.9■■□□□ 1.1
ATF3P18847 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATF3P18847 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATF3P18847 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATF3P18847 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATF3P18847 DRD5P1-201ENST00000456605 1438 ntBASIC21.9■■□□□ 1.1
ATF3P18847 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
ATF3P18847 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ATF3P18847 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC21.9■■□□□ 1.1
ATF3P18847 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ATF3P18847 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATF3P18847 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATF3P18847 AC104457.1-201ENST00000401024 814 ntBASIC21.9■■□□□ 1.1
ATF3P18847 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
ATF3P18847 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
ATF3P18847 KRTAP19-9P-201ENST00000421795 191 ntBASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms