Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CCDC130P13994 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC130P13994 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC130P13994 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC130P13994 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC130P13994 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC130P13994 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC130P13994 AC092580.3-201ENST00000430932 139 ntBASIC17.15■□□□□ 0.34
CCDC130P13994 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.15■□□□□ 0.34
CCDC130P13994 IGHV3-42-201ENST00000520410 361 ntBASIC17.15■□□□□ 0.34
CCDC130P13994 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.15■□□□□ 0.34
CCDC130P13994 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC130P13994 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC130P13994 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.15■□□□□ 0.34
CCDC130P13994 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC130P13994 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCDC130P13994 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC130P13994 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC130P13994 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC130P13994 AL136982.4-201ENST00000437689 1740 ntBASIC17.15■□□□□ 0.34
CCDC130P13994 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC130P13994 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.15■□□□□ 0.34
CCDC130P13994 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC130P13994 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC130P13994 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC130P13994 MTHFR-217ENST00000641820 1569 ntBASIC17.15■□□□□ 0.34
CCDC130P13994 AL035456.1-201ENST00000456064 1369 ntBASIC17.15■□□□□ 0.34
CCDC130P13994 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.34
CCDC130P13994 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
CCDC130P13994 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.14■□□□□ 0.34
CCDC130P13994 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC130P13994 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC130P13994 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CCDC130P13994 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC130P13994 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC130P13994 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC130P13994 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC130P13994 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC130P13994 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC130P13994 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC130P13994 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC130P13994 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC130P13994 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC130P13994 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC130P13994 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CCDC130P13994 AC097493.3-201ENST00000509725 367 ntBASIC17.14■□□□□ 0.33
CCDC130P13994 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.14■□□□□ 0.33
CCDC130P13994 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC130P13994 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC130P13994 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC130P13994 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CCDC130P13994 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC130P13994 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC130P13994 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC130P13994 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC130P13994 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC130P13994 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC130P13994 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC130P13994 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC130P13994 AL391005.1-201ENST00000623953 2435 ntBASIC17.13■□□□□ 0.33
CCDC130P13994 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC130P13994 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC130P13994 NFIC-211ENST00000641145 8399 ntBASIC17.13■□□□□ 0.33
CCDC130P13994 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC130P13994 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC130P13994 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.13■□□□□ 0.33
CCDC130P13994 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC130P13994 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC130P13994 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CCDC130P13994 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC130P13994 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC130P13994 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCDC130P13994 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CCDC130P13994 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CCDC130P13994 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC130P13994 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC130P13994 AC055876.3-201ENST00000431496 288 ntBASIC17.13■□□□□ 0.33
CCDC130P13994 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC130P13994 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCDC130P13994 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC130P13994 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCDC130P13994 AL589739.1-201ENST00000607720 493 ntBASIC17.13■□□□□ 0.33
CCDC130P13994 AC138649.4-201ENST00000612222 287 ntBASIC17.13■□□□□ 0.33
CCDC130P13994 AL138828.2-201ENST00000615812 383 ntBASIC17.13■□□□□ 0.33
CCDC130P13994 AL390754.1-201ENST00000619088 582 ntBASIC17.13■□□□□ 0.33
CCDC130P13994 AC073592.8-201ENST00000624126 511 ntBASIC17.13■□□□□ 0.33
CCDC130P13994 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC130P13994 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC130P13994 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CCDC130P13994 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC130P13994 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC130P13994 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC130P13994 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC130P13994 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC130P13994 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC130P13994 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC130P13994 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC130P13994 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC130P13994 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC130P13994 LINC02199-201ENST00000506655 2702 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms