Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
HLA-DOBP13765 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DOBP13765 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HLA-DOBP13765 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DOBP13765 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DOBP13765 SPDYE10P-202ENST00000612005 668 ntBASIC14.55□□□□□ -0.08
HLA-DOBP13765 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
HLA-DOBP13765 SPDYE8P-202ENST00000612377 668 ntBASIC14.55□□□□□ -0.08
HLA-DOBP13765 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.55□□□□□ -0.08
HLA-DOBP13765 AC008267.7-201ENST00000624570 1194 ntBASIC14.55□□□□□ -0.08
HLA-DOBP13765 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DOBP13765 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DOBP13765 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DOBP13765 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DOBP13765 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DOBP13765 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DOBP13765 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DOBP13765 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DOBP13765 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HLA-DOBP13765 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DOBP13765 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HLA-DOBP13765 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DOBP13765 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DOBP13765 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DOBP13765 AC112504.1-201ENST00000623415 1841 ntBASIC14.55□□□□□ -0.08
HLA-DOBP13765 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
HLA-DOBP13765 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HLA-DOBP13765 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.54□□□□□ -0.08
HLA-DOBP13765 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 PRAL-201ENST00000624952 3286 ntBASIC14.54□□□□□ -0.08
HLA-DOBP13765 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 AC105233.2-201ENST00000523697 349 ntBASIC14.54□□□□□ -0.08
HLA-DOBP13765 AF228730.5-201ENST00000530288 346 ntBASIC14.54□□□□□ -0.08
HLA-DOBP13765 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 AC069224.1-201ENST00000566372 1715 ntBASIC14.54□□□□□ -0.08
HLA-DOBP13765 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 ELL2P1-201ENST00000413990 1906 ntBASIC14.54□□□□□ -0.08
HLA-DOBP13765 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DOBP13765 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DOBP13765 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DOBP13765 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DOBP13765 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DOBP13765 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DOBP13765 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DOBP13765 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DOBP13765 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms