Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCL4P13236 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.19■□□□□ 0.02
CCL4P13236 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.19■□□□□ 0.02
CCL4P13236 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCL4P13236 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
CCL4P13236 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCL4P13236 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CCL4P13236 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCL4P13236 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCL4P13236 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCL4P13236 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CCL4P13236 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
CCL4P13236 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.18■□□□□ 0.02
CCL4P13236 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.18■□□□□ 0.02
CCL4P13236 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCL4P13236 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCL4P13236 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCL4P13236 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CCL4P13236 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
CCL4P13236 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CCL4P13236 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCL4P13236 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCL4P13236 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCL4P13236 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCL4P13236 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.18■□□□□ 0.02
CCL4P13236 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.18■□□□□ 0.02
CCL4P13236 RPL13P2-201ENST00000440687 659 ntBASIC15.18■□□□□ 0.02
CCL4P13236 AC022494.1-201ENST00000466044 728 ntBASIC15.18■□□□□ 0.02
CCL4P13236 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.18■□□□□ 0.02
CCL4P13236 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.18■□□□□ 0.02
CCL4P13236 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.18■□□□□ 0.02
CCL4P13236 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.18■□□□□ 0.02
CCL4P13236 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CCL4P13236 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.18■□□□□ 0.02
CCL4P13236 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCL4P13236 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.18■□□□□ 0.02
CCL4P13236 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.18■□□□□ 0.02
CCL4P13236 RPSAP52-203ENST00000622976 1023 ntBASIC15.18■□□□□ 0.02
CCL4P13236 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.18■□□□□ 0.02
CCL4P13236 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCL4P13236 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCL4P13236 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCL4P13236 BNIP3P1-202ENST00000550043 1585 ntBASIC15.18■□□□□ 0.02
CCL4P13236 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CCL4P13236 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCL4P13236 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.18■□□□□ 0.02
CCL4P13236 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.17■□□□□ 0.02
CCL4P13236 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCL4P13236 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.17■□□□□ 0.02
CCL4P13236 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCL4P13236 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCL4P13236 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCL4P13236 AC092171.3-201ENST00000610122 2651 ntBASIC15.17■□□□□ 0.02
CCL4P13236 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCL4P13236 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCL4P13236 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CCL4P13236 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCL4P13236 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.17■□□□□ 0.02
CCL4P13236 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CCL4P13236 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CCL4P13236 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCL4P13236 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.17■□□□□ 0.02
CCL4P13236 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
CCL4P13236 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCL4P13236 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.17■□□□□ 0.02
CCL4P13236 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCL4P13236 AC074338.1-201ENST00000416825 156 ntBASIC15.17■□□□□ 0.02
CCL4P13236 TARDBPP1-201ENST00000442013 1203 ntBASIC15.17■□□□□ 0.02
CCL4P13236 EEF1DP4-201ENST00000446006 880 ntBASIC15.17■□□□□ 0.02
CCL4P13236 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.17■□□□□ 0.02
CCL4P13236 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.17■□□□□ 0.02
CCL4P13236 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.17■□□□□ 0.02
CCL4P13236 AC036164.1-201ENST00000570544 333 ntBASIC15.17■□□□□ 0.02
CCL4P13236 AC015936.2-201ENST00000593177 259 ntBASIC15.17■□□□□ 0.02
CCL4P13236 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CCL4P13236 COX11-210ENST00000639671 696 ntBASIC15.17■□□□□ 0.02
CCL4P13236 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CCL4P13236 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCL4P13236 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.17■□□□□ 0.02
CCL4P13236 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CCL4P13236 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCL4P13236 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCL4P13236 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CCL4P13236 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.16■□□□□ 0.02
CCL4P13236 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.16■□□□□ 0.02
CCL4P13236 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.16■□□□□ 0.02
CCL4P13236 REXO1L8P-201ENST00000604378 1897 ntBASIC15.16■□□□□ 0.02
CCL4P13236 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
CCL4P13236 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CCL4P13236 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms