Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
PTPRFP10586 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.25■□□□□ 0.51
PTPRFP10586 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPRFP10586 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPRFP10586 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.25■□□□□ 0.51
PTPRFP10586 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 PFN1P12-201ENST00000455938 534 ntBASIC18.25■□□□□ 0.51
PTPRFP10586 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.25■□□□□ 0.51
PTPRFP10586 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPRFP10586 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.25■□□□□ 0.51
PTPRFP10586 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPRFP10586 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.25■□□□□ 0.51
PTPRFP10586 AC068587.10-201ENST00000641210 219 ntBASIC18.25■□□□□ 0.51
PTPRFP10586 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPRFP10586 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPRFP10586 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPRFP10586 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PTPRFP10586 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPRFP10586 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PTPRFP10586 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPRFP10586 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPRFP10586 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPRFP10586 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PTPRFP10586 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPRFP10586 MTX1P1-201ENST00000440904 838 ntBASIC18.24■□□□□ 0.51
PTPRFP10586 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.24■□□□□ 0.51
PTPRFP10586 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.24■□□□□ 0.51
PTPRFP10586 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PTPRFP10586 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
PTPRFP10586 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.24■□□□□ 0.51
PTPRFP10586 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.24■□□□□ 0.51
PTPRFP10586 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.24■□□□□ 0.51
PTPRFP10586 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.24■□□□□ 0.51
PTPRFP10586 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPRFP10586 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPRFP10586 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC18.24■□□□□ 0.51
PTPRFP10586 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.24■□□□□ 0.51
PTPRFP10586 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPRFP10586 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.24■□□□□ 0.51
PTPRFP10586 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPRFP10586 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPRFP10586 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPRFP10586 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PTPRFP10586 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPRFP10586 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPRFP10586 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PTPRFP10586 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.23■□□□□ 0.51
PTPRFP10586 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPRFP10586 CNN2P10-201ENST00000443067 918 ntBASIC18.23■□□□□ 0.51
PTPRFP10586 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.23■□□□□ 0.51
PTPRFP10586 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.23■□□□□ 0.51
PTPRFP10586 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.23■□□□□ 0.51
PTPRFP10586 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
PTPRFP10586 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPRFP10586 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.23■□□□□ 0.51
PTPRFP10586 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PTPRFP10586 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
PTPRFP10586 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPRFP10586 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PTPRFP10586 MIR326-201ENST00000362220 95 ntBASIC18.23■□□□□ 0.51
PTPRFP10586 HAUS4P1-201ENST00000406739 1145 ntBASIC18.23■□□□□ 0.51
PTPRFP10586 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18.23■□□□□ 0.51
PTPRFP10586 GPAA1P2-201ENST00000417923 928 ntBASIC18.23■□□□□ 0.51
PTPRFP10586 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.23■□□□□ 0.51
PTPRFP10586 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.23■□□□□ 0.51
PTPRFP10586 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPRFP10586 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPRFP10586 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPRFP10586 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PTPRFP10586 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPRFP10586 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPRFP10586 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPRFP10586 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPRFP10586 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPRFP10586 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPRFP10586 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPRFP10586 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPRFP10586 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.22■□□□□ 0.51
PTPRFP10586 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPRFP10586 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
PTPRFP10586 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PTPRFP10586 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPRFP10586 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PTPRFP10586 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC18.22■□□□□ 0.51
PTPRFP10586 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.22■□□□□ 0.51
PTPRFP10586 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PTPRFP10586 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPRFP10586 ALOX12P2-203ENST00000570921 1945 ntBASIC18.22■□□□□ 0.51
PTPRFP10586 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPRFP10586 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPRFP10586 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.22■□□□□ 0.51
PTPRFP10586 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms