Protein–RNA interactions for Protein: P0C5Y9

H2AFB1, Histone H2A-Bbd type 1, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFB1P0C5Y9 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 RPS2P55-201ENST00000397318 883 ntBASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 AP000523.1-201ENST00000398242 1049 ntBASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 AC104771.1-201ENST00000603335 964 ntBASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2AFB1P0C5Y9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 AL353692.3-201ENST00000407031 1396 ntBASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 MIR648-201ENST00000385046 94 ntBASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 AC107956.1-201ENST00000494359 873 ntBASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 AC092666.2-201ENST00000613287 246 ntBASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.13□□□□□ -0.31
H2AFB1P0C5Y9 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2AFB1P0C5Y9 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2AFB1P0C5Y9 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2AFB1P0C5Y9 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.12□□□□□ -0.31
H2AFB1P0C5Y9 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.12□□□□□ -0.31
H2AFB1P0C5Y9 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2AFB1P0C5Y9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.12□□□□□ -0.31
H2AFB1P0C5Y9 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.12□□□□□ -0.31
H2AFB1P0C5Y9 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
H2AFB1P0C5Y9 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H2AFB1P0C5Y9 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms