Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.69□□□□□ -0.06
FREM3P0C091 AL079307.3-201ENST00000556114 283 ntBASIC14.69□□□□□ -0.06
FREM3P0C091 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.69□□□□□ -0.06
FREM3P0C091 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.69□□□□□ -0.06
FREM3P0C091 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
FREM3P0C091 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.69□□□□□ -0.06
FREM3P0C091 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.69□□□□□ -0.06
FREM3P0C091 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.69□□□□□ -0.06
FREM3P0C091 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
FREM3P0C091 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.69□□□□□ -0.06
FREM3P0C091 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.69□□□□□ -0.06
FREM3P0C091 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
FREM3P0C091 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
FREM3P0C091 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
FREM3P0C091 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
FREM3P0C091 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
FREM3P0C091 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
FREM3P0C091 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
FREM3P0C091 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.69□□□□□ -0.06
FREM3P0C091 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.69□□□□□ -0.06
FREM3P0C091 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.69□□□□□ -0.06
FREM3P0C091 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
FREM3P0C091 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.69□□□□□ -0.06
FREM3P0C091 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
FREM3P0C091 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.69□□□□□ -0.06
FREM3P0C091 AL512361.1-201ENST00000554200 418 ntBASIC14.69□□□□□ -0.06
FREM3P0C091 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.69□□□□□ -0.06
FREM3P0C091 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
FREM3P0C091 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.69□□□□□ -0.06
FREM3P0C091 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
FREM3P0C091 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
FREM3P0C091 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.69□□□□□ -0.06
FREM3P0C091 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
FREM3P0C091 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FREM3P0C091 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FREM3P0C091 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FREM3P0C091 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.68□□□□□ -0.06
FREM3P0C091 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.68□□□□□ -0.06
FREM3P0C091 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
FREM3P0C091 U82695.1-201ENST00000635752 1889 ntBASIC14.68□□□□□ -0.06
FREM3P0C091 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
FREM3P0C091 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FREM3P0C091 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
FREM3P0C091 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
FREM3P0C091 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
FREM3P0C091 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
FREM3P0C091 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FREM3P0C091 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FREM3P0C091 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
FREM3P0C091 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
FREM3P0C091 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
FREM3P0C091 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.68□□□□□ -0.06
FREM3P0C091 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.68□□□□□ -0.06
FREM3P0C091 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.68□□□□□ -0.06
FREM3P0C091 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
FREM3P0C091 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.68□□□□□ -0.06
FREM3P0C091 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
FREM3P0C091 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.68□□□□□ -0.06
FREM3P0C091 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FREM3P0C091 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FREM3P0C091 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
FREM3P0C091 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FREM3P0C091 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FREM3P0C091 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.68□□□□□ -0.06
FREM3P0C091 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
FREM3P0C091 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
FREM3P0C091 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.68□□□□□ -0.06
FREM3P0C091 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
FREM3P0C091 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.68□□□□□ -0.06
FREM3P0C091 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
FREM3P0C091 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FREM3P0C091 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
FREM3P0C091 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.68□□□□□ -0.06
FREM3P0C091 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.68□□□□□ -0.06
FREM3P0C091 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.68□□□□□ -0.06
FREM3P0C091 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.68□□□□□ -0.06
FREM3P0C091 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.68□□□□□ -0.06
FREM3P0C091 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
FREM3P0C091 CRB3P1-201ENST00000449338 276 ntBASIC14.68□□□□□ -0.06
FREM3P0C091 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
FREM3P0C091 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.68□□□□□ -0.06
FREM3P0C091 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
FREM3P0C091 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.68□□□□□ -0.06
FREM3P0C091 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.68□□□□□ -0.06
FREM3P0C091 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.68□□□□□ -0.06
FREM3P0C091 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.68□□□□□ -0.06
FREM3P0C091 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.68□□□□□ -0.06
FREM3P0C091 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FREM3P0C091 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FREM3P0C091 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
FREM3P0C091 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
FREM3P0C091 AL589702.1-201ENST00000641229 1509 ntBASIC14.67□□□□□ -0.06
FREM3P0C091 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
FREM3P0C091 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
FREM3P0C091 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FREM3P0C091 AC010491.1-201ENST00000563101 2797 ntBASIC14.67□□□□□ -0.06
FREM3P0C091 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FREM3P0C091 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.67□□□□□ -0.06
FREM3P0C091 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FREM3P0C091 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms