Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC19.45■□□□□ 0.7
COL4A1P02462 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
COL4A1P02462 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.45■□□□□ 0.7
COL4A1P02462 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
COL4A1P02462 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A1P02462 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
COL4A1P02462 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A1P02462 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
COL4A1P02462 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A1P02462 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A1P02462 RPF1-202ENST00000370656 724 ntTSL 2 BASIC19.45■□□□□ 0.7
COL4A1P02462 AC092933.1-201ENST00000393644 945 ntBASIC19.45■□□□□ 0.7
COL4A1P02462 C1QBPP1-201ENST00000400117 770 ntBASIC19.45■□□□□ 0.7
COL4A1P02462 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A1P02462 AC134915.1-201ENST00000426461 574 ntBASIC19.45■□□□□ 0.7
COL4A1P02462 KRT18P43-201ENST00000469825 1281 ntBASIC19.45■□□□□ 0.7
COL4A1P02462 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.45■□□□□ 0.7
COL4A1P02462 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.45■□□□□ 0.7
COL4A1P02462 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.45■□□□□ 0.7
COL4A1P02462 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.45■□□□□ 0.7
COL4A1P02462 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
COL4A1P02462 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC19.45■□□□□ 0.7
COL4A1P02462 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.45■□□□□ 0.7
COL4A1P02462 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.45■□□□□ 0.7
COL4A1P02462 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A1P02462 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
COL4A1P02462 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
COL4A1P02462 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
COL4A1P02462 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A1P02462 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A1P02462 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A1P02462 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A1P02462 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.44■□□□□ 0.7
COL4A1P02462 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A1P02462 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A1P02462 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A1P02462 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
COL4A1P02462 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.44■□□□□ 0.7
COL4A1P02462 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A1P02462 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A1P02462 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
COL4A1P02462 BOLA2P3-201ENST00000404566 256 ntBASIC19.44■□□□□ 0.7
COL4A1P02462 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC19.44■□□□□ 0.7
COL4A1P02462 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A1P02462 RPL7P3-201ENST00000441388 714 ntBASIC19.44■□□□□ 0.7
COL4A1P02462 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC19.44■□□□□ 0.7
COL4A1P02462 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.44■□□□□ 0.7
COL4A1P02462 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
COL4A1P02462 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.44■□□□□ 0.7
COL4A1P02462 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.44■□□□□ 0.7
COL4A1P02462 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A1P02462 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A1P02462 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL4A1P02462 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
COL4A1P02462 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
COL4A1P02462 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
COL4A1P02462 AL662844.4-201ENST00000606367 2838 ntBASIC19.43■□□□□ 0.7
COL4A1P02462 AC018695.7-201ENST00000624587 2492 ntBASIC19.43■□□□□ 0.7
COL4A1P02462 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A1P02462 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A1P02462 AC026954.1-201ENST00000429771 1293 ntBASIC19.43■□□□□ 0.7
COL4A1P02462 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
COL4A1P02462 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.43■□□□□ 0.7
COL4A1P02462 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC19.43■□□□□ 0.7
COL4A1P02462 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.43■□□□□ 0.7
COL4A1P02462 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19.43■□□□□ 0.7
COL4A1P02462 GPR182-203ENST00000622922 591 ntBASIC19.43■□□□□ 0.7
COL4A1P02462 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.43■□□□□ 0.7
COL4A1P02462 DRD5P1-201ENST00000456605 1438 ntBASIC19.43■□□□□ 0.7
COL4A1P02462 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A1P02462 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.43■□□□□ 0.7
COL4A1P02462 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A1P02462 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A1P02462 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A1P02462 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC19.43■□□□□ 0.7
COL4A1P02462 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A1P02462 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
COL4A1P02462 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A1P02462 AL355994.2-201ENST00000447882 704 ntBASIC19.43■□□□□ 0.7
COL4A1P02462 AC099548.2-209ENST00000480264 625 ntBASIC19.43■□□□□ 0.7
COL4A1P02462 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL4A1P02462 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
COL4A1P02462 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
COL4A1P02462 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.42■□□□□ 0.7
COL4A1P02462 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.42■□□□□ 0.7
COL4A1P02462 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC19.42■□□□□ 0.7
COL4A1P02462 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A1P02462 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A1P02462 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.42■□□□□ 0.7
COL4A1P02462 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
COL4A1P02462 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A1P02462 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A1P02462 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A1P02462 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A1P02462 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A1P02462 APOA1-205ENST00000375329 927 ntTSL 2 BASIC19.42■□□□□ 0.7
COL4A1P02462 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC19.42■□□□□ 0.7
COL4A1P02462 OLR1-203ENST00000432556 950 ntTSL 2 BASIC19.42■□□□□ 0.7
COL4A1P02462 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC19.42■□□□□ 0.7
COL4A1P02462 KLF2P4-201ENST00000451959 1225 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms