Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD4P01730 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.79■□□□□ 0.44
CD4P01730 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.79■□□□□ 0.44
CD4P01730 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CD4P01730 AC078925.2-201ENST00000624013 1973 ntBASIC17.79■□□□□ 0.44
CD4P01730 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD4P01730 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CD4P01730 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD4P01730 MIR1908-201ENST00000410394 80 ntBASIC17.79■□□□□ 0.44
CD4P01730 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
CD4P01730 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.79■□□□□ 0.44
CD4P01730 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CD4P01730 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.79■□□□□ 0.44
CD4P01730 RN7SL399P-201ENST00000471648 279 ntBASIC17.79■□□□□ 0.44
CD4P01730 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CD4P01730 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.79■□□□□ 0.44
CD4P01730 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CD4P01730 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.79■□□□□ 0.44
CD4P01730 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD4P01730 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.79■□□□□ 0.44
CD4P01730 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.79■□□□□ 0.44
CD4P01730 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CD4P01730 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CD4P01730 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD4P01730 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
CD4P01730 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.79■□□□□ 0.44
CD4P01730 CYP4F24P-201ENST00000586049 1580 ntBASIC17.79■□□□□ 0.44
CD4P01730 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.78■□□□□ 0.44
CD4P01730 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD4P01730 AL133338.1-201ENST00000565695 1517 ntBASIC17.78■□□□□ 0.44
CD4P01730 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD4P01730 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.78■□□□□ 0.44
CD4P01730 AC093525.8-201ENST00000624099 1342 ntBASIC17.78■□□□□ 0.44
CD4P01730 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD4P01730 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD4P01730 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD4P01730 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CD4P01730 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD4P01730 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CD4P01730 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD4P01730 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.78■□□□□ 0.44
CD4P01730 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CD4P01730 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.78■□□□□ 0.44
CD4P01730 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD4P01730 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.78■□□□□ 0.44
CD4P01730 SLC25A47P1-201ENST00000531577 414 ntBASIC17.78■□□□□ 0.44
CD4P01730 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CD4P01730 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CD4P01730 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.78■□□□□ 0.44
CD4P01730 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.78■□□□□ 0.44
CD4P01730 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.78■□□□□ 0.44
CD4P01730 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CD4P01730 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.78■□□□□ 0.44
CD4P01730 Z97205.2-201ENST00000564697 1639 ntBASIC17.78■□□□□ 0.44
CD4P01730 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD4P01730 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD4P01730 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD4P01730 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.78■□□□□ 0.44
CD4P01730 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD4P01730 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD4P01730 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD4P01730 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD4P01730 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD4P01730 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD4P01730 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CD4P01730 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD4P01730 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD4P01730 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD4P01730 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.78■□□□□ 0.44
CD4P01730 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD4P01730 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD4P01730 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.78■□□□□ 0.44
CD4P01730 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.77■□□□□ 0.44
CD4P01730 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD4P01730 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CD4P01730 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD4P01730 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD4P01730 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CD4P01730 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD4P01730 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD4P01730 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CD4P01730 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.77■□□□□ 0.44
CD4P01730 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
CD4P01730 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD4P01730 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CD4P01730 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CD4P01730 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.77■□□□□ 0.44
CD4P01730 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CD4P01730 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CD4P01730 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.77■□□□□ 0.44
CD4P01730 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.77■□□□□ 0.44
CD4P01730 MIR6869-201ENST00000619434 62 ntBASIC17.77■□□□□ 0.44
CD4P01730 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.77■□□□□ 0.44
CD4P01730 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD4P01730 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CD4P01730 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CD4P01730 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD4P01730 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD4P01730 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.77■□□□□ 0.43
CD4P01730 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms