Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A1P00352 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.25■□□□□ 0.51
ALDH1A1P00352 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.25■□□□□ 0.51
ALDH1A1P00352 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A1P00352 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18.25■□□□□ 0.51
ALDH1A1P00352 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A1P00352 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ALDH1A1P00352 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
ALDH1A1P00352 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.25■□□□□ 0.51
ALDH1A1P00352 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A1P00352 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.25■□□□□ 0.51
ALDH1A1P00352 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A1P00352 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
ALDH1A1P00352 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A1P00352 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A1P00352 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ALDH1A1P00352 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
ALDH1A1P00352 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A1P00352 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A1P00352 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A1P00352 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A1P00352 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A1P00352 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
ALDH1A1P00352 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A1P00352 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A1P00352 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A1P00352 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.24■□□□□ 0.51
ALDH1A1P00352 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A1P00352 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A1P00352 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.24■□□□□ 0.51
ALDH1A1P00352 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A1P00352 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A1P00352 HNRNPA1P32-201ENST00000396326 963 ntBASIC18.24■□□□□ 0.51
ALDH1A1P00352 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
ALDH1A1P00352 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC18.24■□□□□ 0.51
ALDH1A1P00352 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A1P00352 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.24■□□□□ 0.51
ALDH1A1P00352 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC18.24■□□□□ 0.51
ALDH1A1P00352 LDHBP1-201ENST00000455730 1119 ntBASIC18.24■□□□□ 0.51
ALDH1A1P00352 RPSAP36-202ENST00000494591 1261 ntBASIC18.24■□□□□ 0.51
ALDH1A1P00352 HIST2H2BC-201ENST00000498492 580 ntBASIC18.24■□□□□ 0.51
ALDH1A1P00352 AC026410.3-201ENST00000514280 936 ntBASIC18.24■□□□□ 0.51
ALDH1A1P00352 ACR-203ENST00000529621 708 ntTSL 5 BASIC18.24■□□□□ 0.51
ALDH1A1P00352 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.24■□□□□ 0.51
ALDH1A1P00352 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC18.24■□□□□ 0.51
ALDH1A1P00352 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.24■□□□□ 0.51
ALDH1A1P00352 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC18.24■□□□□ 0.51
ALDH1A1P00352 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A1P00352 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A1P00352 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.24■□□□□ 0.51
ALDH1A1P00352 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A1P00352 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.24■□□□□ 0.51
ALDH1A1P00352 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
ALDH1A1P00352 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ALDH1A1P00352 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.24■□□□□ 0.51
ALDH1A1P00352 REXO1L8P-201ENST00000604378 1897 ntBASIC18.24■□□□□ 0.51
ALDH1A1P00352 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A1P00352 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
ALDH1A1P00352 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A1P00352 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
ALDH1A1P00352 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.23■□□□□ 0.51
ALDH1A1P00352 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A1P00352 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A1P00352 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
ALDH1A1P00352 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A1P00352 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A1P00352 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A1P00352 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A1P00352 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.23■□□□□ 0.51
ALDH1A1P00352 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A1P00352 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A1P00352 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ALDH1A1P00352 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A1P00352 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.23■□□□□ 0.51
ALDH1A1P00352 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A1P00352 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A1P00352 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
ALDH1A1P00352 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.23■□□□□ 0.51
ALDH1A1P00352 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A1P00352 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A1P00352 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.23■□□□□ 0.51
ALDH1A1P00352 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A1P00352 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
ALDH1A1P00352 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
ALDH1A1P00352 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A1P00352 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.23■□□□□ 0.51
ALDH1A1P00352 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.23■□□□□ 0.51
ALDH1A1P00352 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A1P00352 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
ALDH1A1P00352 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A1P00352 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
ALDH1A1P00352 KRT18P64-201ENST00000434946 1219 ntBASIC18.23■□□□□ 0.51
ALDH1A1P00352 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ALDH1A1P00352 MAGEA5-201ENST00000446757 942 ntBASIC18.23■□□□□ 0.51
ALDH1A1P00352 RPS2P36-201ENST00000456516 831 ntBASIC18.23■□□□□ 0.51
ALDH1A1P00352 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A1P00352 KRT18P25-201ENST00000508931 1278 ntBASIC18.23■□□□□ 0.51
ALDH1A1P00352 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.23■□□□□ 0.51
ALDH1A1P00352 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC18.23■□□□□ 0.51
ALDH1A1P00352 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms