Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.3■□□□□ 0.2
RFPL1O75677 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFPL1O75677 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.3■□□□□ 0.2
RFPL1O75677 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFPL1O75677 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.29■□□□□ 0.2
RFPL1O75677 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFPL1O75677 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RFPL1O75677 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFPL1O75677 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFPL1O75677 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RFPL1O75677 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFPL1O75677 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFPL1O75677 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RFPL1O75677 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFPL1O75677 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFPL1O75677 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFPL1O75677 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.29■□□□□ 0.2
RFPL1O75677 RNU1-129P-201ENST00000384064 167 ntBASIC16.29■□□□□ 0.2
RFPL1O75677 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFPL1O75677 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RFPL1O75677 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.29■□□□□ 0.2
RFPL1O75677 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.29■□□□□ 0.2
RFPL1O75677 KRT18P2-201ENST00000447938 1258 ntBASIC16.29■□□□□ 0.2
RFPL1O75677 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.29■□□□□ 0.2
RFPL1O75677 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.29■□□□□ 0.2
RFPL1O75677 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.29■□□□□ 0.2
RFPL1O75677 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFPL1O75677 U1.21-201ENST00000580816 167 ntBASIC16.29■□□□□ 0.2
RFPL1O75677 MIR4515-201ENST00000584082 81 ntBASIC16.29■□□□□ 0.2
RFPL1O75677 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.29■□□□□ 0.2
RFPL1O75677 LINC02084-201ENST00000606069 1096 ntBASIC16.29■□□□□ 0.2
RFPL1O75677 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.29■□□□□ 0.2
RFPL1O75677 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFPL1O75677 AC006058.4-201ENST00000624016 1670 ntBASIC16.29■□□□□ 0.2
RFPL1O75677 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFPL1O75677 AP003680.1-201ENST00000598970 3660 ntBASIC16.29■□□□□ 0.2
RFPL1O75677 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.29■□□□□ 0.2
RFPL1O75677 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFPL1O75677 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFPL1O75677 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.29■□□□□ 0.2
RFPL1O75677 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.29■□□□□ 0.2
RFPL1O75677 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.29■□□□□ 0.2
RFPL1O75677 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFPL1O75677 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RFPL1O75677 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFPL1O75677 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFPL1O75677 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.29■□□□□ 0.2
RFPL1O75677 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
RFPL1O75677 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFPL1O75677 AC020658.6-201ENST00000623564 1870 ntBASIC16.29■□□□□ 0.2
RFPL1O75677 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFPL1O75677 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFPL1O75677 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.28■□□□□ 0.2
RFPL1O75677 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFPL1O75677 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RFPL1O75677 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFPL1O75677 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RFPL1O75677 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.28■□□□□ 0.2
RFPL1O75677 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFPL1O75677 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RFPL1O75677 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFPL1O75677 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RFPL1O75677 FAM185BP-201ENST00000443595 716 ntBASIC16.28■□□□□ 0.2
RFPL1O75677 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFPL1O75677 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFPL1O75677 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.28■□□□□ 0.2
RFPL1O75677 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFPL1O75677 YBX1P5-201ENST00000509441 847 ntBASIC16.28■□□□□ 0.2
RFPL1O75677 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFPL1O75677 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.28■□□□□ 0.2
RFPL1O75677 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFPL1O75677 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFPL1O75677 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.28■□□□□ 0.2
RFPL1O75677 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
RFPL1O75677 MIR4469-201ENST00000583919 79 ntBASIC16.28■□□□□ 0.2
RFPL1O75677 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.28■□□□□ 0.2
RFPL1O75677 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFPL1O75677 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFPL1O75677 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFPL1O75677 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFPL1O75677 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFPL1O75677 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFPL1O75677 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RFPL1O75677 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
RFPL1O75677 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
RFPL1O75677 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFPL1O75677 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFPL1O75677 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.28■□□□□ 0.2
RFPL1O75677 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFPL1O75677 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.28■□□□□ 0.2
RFPL1O75677 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.28■□□□□ 0.2
RFPL1O75677 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.28■□□□□ 0.2
RFPL1O75677 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFPL1O75677 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.27■□□□□ 0.2
RFPL1O75677 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.27■□□□□ 0.2
RFPL1O75677 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFPL1O75677 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RFPL1O75677 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.27■□□□□ 0.2
RFPL1O75677 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFPL1O75677 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms