Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LRCH4O75427 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.85■□□□□ 0.29
LRCH4O75427 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.85■□□□□ 0.29
LRCH4O75427 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.85■□□□□ 0.29
LRCH4O75427 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.85■□□□□ 0.29
LRCH4O75427 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
LRCH4O75427 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LRCH4O75427 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH4O75427 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH4O75427 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH4O75427 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH4O75427 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LRCH4O75427 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH4O75427 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH4O75427 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH4O75427 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
LRCH4O75427 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.84■□□□□ 0.29
LRCH4O75427 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.84■□□□□ 0.29
LRCH4O75427 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH4O75427 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH4O75427 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH4O75427 HLA-H-201ENST00000383620 1096 ntBASIC16.84■□□□□ 0.29
LRCH4O75427 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.84■□□□□ 0.29
LRCH4O75427 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LRCH4O75427 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH4O75427 MIR4469-201ENST00000583919 79 ntBASIC16.84■□□□□ 0.29
LRCH4O75427 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LRCH4O75427 AL513210.1-201ENST00000629608 234 ntBASIC16.84■□□□□ 0.29
LRCH4O75427 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH4O75427 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH4O75427 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH4O75427 UXT-AS1-201ENST00000590504 1525 ntBASIC16.84■□□□□ 0.29
LRCH4O75427 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH4O75427 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH4O75427 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.84■□□□□ 0.29
LRCH4O75427 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH4O75427 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH4O75427 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH4O75427 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH4O75427 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.84■□□□□ 0.29
LRCH4O75427 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LRCH4O75427 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH4O75427 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
LRCH4O75427 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LRCH4O75427 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LRCH4O75427 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
LRCH4O75427 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRCH4O75427 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH4O75427 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH4O75427 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH4O75427 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH4O75427 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.83■□□□□ 0.28
LRCH4O75427 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
LRCH4O75427 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH4O75427 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH4O75427 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH4O75427 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH4O75427 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.83■□□□□ 0.28
LRCH4O75427 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.83■□□□□ 0.28
LRCH4O75427 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.83■□□□□ 0.28
LRCH4O75427 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH4O75427 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LRCH4O75427 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.83■□□□□ 0.28
LRCH4O75427 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.83■□□□□ 0.28
LRCH4O75427 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.83■□□□□ 0.28
LRCH4O75427 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
LRCH4O75427 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.83■□□□□ 0.28
LRCH4O75427 AC010327.4-202ENST00000591484 748 ntBASIC16.83■□□□□ 0.28
LRCH4O75427 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
LRCH4O75427 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.83■□□□□ 0.28
LRCH4O75427 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
LRCH4O75427 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH4O75427 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH4O75427 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRCH4O75427 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.83■□□□□ 0.28
LRCH4O75427 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LRCH4O75427 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH4O75427 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH4O75427 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH4O75427 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.82■□□□□ 0.28
LRCH4O75427 AP3S2-216ENST00000617003 1561 ntBASIC16.82■□□□□ 0.28
LRCH4O75427 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.82■□□□□ 0.28
LRCH4O75427 AL139384.1-201ENST00000612143 3047 ntBASIC16.82■□□□□ 0.28
LRCH4O75427 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH4O75427 AL691432.1-201ENST00000596308 1422 ntBASIC16.82■□□□□ 0.28
LRCH4O75427 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LRCH4O75427 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
LRCH4O75427 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH4O75427 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH4O75427 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH4O75427 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH4O75427 RPSAP43-201ENST00000402237 625 ntBASIC16.82■□□□□ 0.28
LRCH4O75427 BX842568.4-201ENST00000421222 227 ntBASIC16.82■□□□□ 0.28
LRCH4O75427 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms