Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KDELR3O43731 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.37■□□□□ 0.21
KDELR3O43731 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.37■□□□□ 0.21
KDELR3O43731 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KDELR3O43731 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KDELR3O43731 FO393414.2-201ENST00000405153 598 ntBASIC16.37■□□□□ 0.21
KDELR3O43731 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.37■□□□□ 0.21
KDELR3O43731 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.37■□□□□ 0.21
KDELR3O43731 EEF1DP4-201ENST00000446006 880 ntBASIC16.37■□□□□ 0.21
KDELR3O43731 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.37■□□□□ 0.21
KDELR3O43731 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.37■□□□□ 0.21
KDELR3O43731 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.37■□□□□ 0.21
KDELR3O43731 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.37■□□□□ 0.21
KDELR3O43731 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.37■□□□□ 0.21
KDELR3O43731 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KDELR3O43731 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
KDELR3O43731 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KDELR3O43731 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KDELR3O43731 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.37■□□□□ 0.21
KDELR3O43731 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KDELR3O43731 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
KDELR3O43731 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.37■□□□□ 0.21
KDELR3O43731 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KDELR3O43731 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
KDELR3O43731 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KDELR3O43731 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.37■□□□□ 0.21
KDELR3O43731 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
KDELR3O43731 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.36■□□□□ 0.21
KDELR3O43731 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KDELR3O43731 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
KDELR3O43731 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KDELR3O43731 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KDELR3O43731 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
KDELR3O43731 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
KDELR3O43731 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
KDELR3O43731 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.36■□□□□ 0.21
KDELR3O43731 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KDELR3O43731 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KDELR3O43731 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
KDELR3O43731 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.36■□□□□ 0.21
KDELR3O43731 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
KDELR3O43731 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KDELR3O43731 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.36■□□□□ 0.21
KDELR3O43731 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KDELR3O43731 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.36■□□□□ 0.21
KDELR3O43731 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KDELR3O43731 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KDELR3O43731 BASP1P1-201ENST00000430708 665 ntBASIC16.36■□□□□ 0.21
KDELR3O43731 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.36■□□□□ 0.21
KDELR3O43731 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.36■□□□□ 0.21
KDELR3O43731 AC093214.1-201ENST00000511688 1107 ntBASIC16.36■□□□□ 0.21
KDELR3O43731 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.36■□□□□ 0.21
KDELR3O43731 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KDELR3O43731 AL390754.1-201ENST00000619088 582 ntBASIC16.36■□□□□ 0.21
KDELR3O43731 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
KDELR3O43731 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KDELR3O43731 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.36■□□□□ 0.21
KDELR3O43731 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
KDELR3O43731 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KDELR3O43731 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KDELR3O43731 AC087499.5-201ENST00000452760 1342 ntBASIC16.36■□□□□ 0.21
KDELR3O43731 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
KDELR3O43731 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KDELR3O43731 CDC14C-201ENST00000428251 1719 ntBASIC16.36■□□□□ 0.21
KDELR3O43731 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.36■□□□□ 0.21
KDELR3O43731 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.36■□□□□ 0.21
KDELR3O43731 AL391005.1-201ENST00000623953 2435 ntBASIC16.36■□□□□ 0.21
KDELR3O43731 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.36■□□□□ 0.21
KDELR3O43731 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.35■□□□□ 0.21
KDELR3O43731 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDELR3O43731 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDELR3O43731 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
KDELR3O43731 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDELR3O43731 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
KDELR3O43731 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KDELR3O43731 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KDELR3O43731 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDELR3O43731 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDELR3O43731 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDELR3O43731 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDELR3O43731 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
KDELR3O43731 CROCCP1-201ENST00000426910 5675 ntBASIC16.35■□□□□ 0.21
KDELR3O43731 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDELR3O43731 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.35■□□□□ 0.21
KDELR3O43731 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.35■□□□□ 0.21
KDELR3O43731 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDELR3O43731 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDELR3O43731 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KDELR3O43731 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDELR3O43731 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.35■□□□□ 0.21
KDELR3O43731 TSSK5P-201ENST00000423978 907 ntBASIC16.35■□□□□ 0.21
KDELR3O43731 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.35■□□□□ 0.21
KDELR3O43731 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDELR3O43731 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.35■□□□□ 0.21
KDELR3O43731 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.35■□□□□ 0.21
KDELR3O43731 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.35■□□□□ 0.21
KDELR3O43731 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.35■□□□□ 0.21
KDELR3O43731 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KDELR3O43731 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.35■□□□□ 0.21
KDELR3O43731 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms