Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSI1O43347 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSI1O43347 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MSI1O43347 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.81■□□□□ 0.28
MSI1O43347 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MSI1O43347 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSI1O43347 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
MSI1O43347 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.81■□□□□ 0.28
MSI1O43347 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSI1O43347 AL162727.3-201ENST00000635661 2787 ntBASIC16.81■□□□□ 0.28
MSI1O43347 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSI1O43347 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSI1O43347 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MSI1O43347 CETN4P-206ENST00000642099 2168 ntBASIC16.81■□□□□ 0.28
MSI1O43347 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.81■□□□□ 0.28
MSI1O43347 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.8■□□□□ 0.28
MSI1O43347 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.8■□□□□ 0.28
MSI1O43347 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MSI1O43347 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MSI1O43347 AL596087.1-201ENST00000400979 1969 ntBASIC16.8■□□□□ 0.28
MSI1O43347 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.8■□□□□ 0.28
MSI1O43347 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
MSI1O43347 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MSI1O43347 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
MSI1O43347 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
MSI1O43347 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MSI1O43347 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MSI1O43347 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.8■□□□□ 0.28
MSI1O43347 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.8■□□□□ 0.28
MSI1O43347 AL080243.2-201ENST00000418783 582 ntBASIC16.8■□□□□ 0.28
MSI1O43347 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.8■□□□□ 0.28
MSI1O43347 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.8■□□□□ 0.28
MSI1O43347 AL079307.3-201ENST00000556114 283 ntBASIC16.8■□□□□ 0.28
MSI1O43347 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.8■□□□□ 0.28
MSI1O43347 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.8■□□□□ 0.28
MSI1O43347 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.8■□□□□ 0.28
MSI1O43347 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.8■□□□□ 0.28
MSI1O43347 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.8■□□□□ 0.28
MSI1O43347 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MSI1O43347 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MSI1O43347 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
MSI1O43347 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
MSI1O43347 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MSI1O43347 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
MSI1O43347 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MSI1O43347 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.8■□□□□ 0.28
MSI1O43347 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MSI1O43347 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MSI1O43347 AC100757.3-201ENST00000622361 1406 ntBASIC16.79■□□□□ 0.28
MSI1O43347 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
MSI1O43347 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MSI1O43347 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.79■□□□□ 0.28
MSI1O43347 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.79■□□□□ 0.28
MSI1O43347 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MSI1O43347 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.79■□□□□ 0.28
MSI1O43347 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MSI1O43347 CICP6-201ENST00000457191 2729 ntBASIC16.79■□□□□ 0.28
MSI1O43347 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
MSI1O43347 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MSI1O43347 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.79■□□□□ 0.28
MSI1O43347 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MSI1O43347 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
MSI1O43347 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
MSI1O43347 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MSI1O43347 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.79■□□□□ 0.28
MSI1O43347 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
MSI1O43347 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
MSI1O43347 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MSI1O43347 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MSI1O43347 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.79■□□□□ 0.28
MSI1O43347 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MSI1O43347 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MSI1O43347 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.79■□□□□ 0.28
MSI1O43347 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
MSI1O43347 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MSI1O43347 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.79■□□□□ 0.28
MSI1O43347 AL139010.1-201ENST00000454878 894 ntBASIC16.79■□□□□ 0.28
MSI1O43347 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.79■□□□□ 0.28
MSI1O43347 HLA-V-204ENST00000476601 1289 ntBASIC16.79■□□□□ 0.28
MSI1O43347 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.79■□□□□ 0.28
MSI1O43347 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
MSI1O43347 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.79■□□□□ 0.28
MSI1O43347 AC026979.3-201ENST00000607315 403 ntBASIC16.79■□□□□ 0.28
MSI1O43347 TEX28P1-201ENST00000613479 1221 ntBASIC16.79■□□□□ 0.28
MSI1O43347 TEX28P2-201ENST00000617764 1221 ntBASIC16.79■□□□□ 0.28
MSI1O43347 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
MSI1O43347 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MSI1O43347 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MSI1O43347 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.79■□□□□ 0.28
MSI1O43347 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
MSI1O43347 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MSI1O43347 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.79■□□□□ 0.28
MSI1O43347 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MSI1O43347 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.79■□□□□ 0.28
MSI1O43347 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MSI1O43347 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.79■□□□□ 0.28
MSI1O43347 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MSI1O43347 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MSI1O43347 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MSI1O43347 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms