Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF9O43307 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ARHGEF9O43307 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF9O43307 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF9O43307 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
ARHGEF9O43307 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ARHGEF9O43307 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF9O43307 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF9O43307 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF9O43307 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.16■□□□□ 0.02
ARHGEF9O43307 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF9O43307 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF9O43307 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF9O43307 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF9O43307 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF9O43307 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ARHGEF9O43307 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.15■□□□□ 0.02
ARHGEF9O43307 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
ARHGEF9O43307 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.15■□□□□ 0.02
ARHGEF9O43307 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF9O43307 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF9O43307 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF9O43307 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF9O43307 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF9O43307 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF9O43307 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF9O43307 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ARHGEF9O43307 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ARHGEF9O43307 AC211486.1-202ENST00000416371 468 ntBASIC15.15■□□□□ 0.02
ARHGEF9O43307 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.15■□□□□ 0.02
ARHGEF9O43307 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF9O43307 AC211476.1-201ENST00000503899 468 ntBASIC15.15■□□□□ 0.02
ARHGEF9O43307 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF9O43307 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.15■□□□□ 0.02
ARHGEF9O43307 MTDHP4-201ENST00000600287 670 ntBASIC15.15■□□□□ 0.02
ARHGEF9O43307 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF9O43307 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
ARHGEF9O43307 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF9O43307 KRT8P49-201ENST00000604166 1432 ntBASIC15.15■□□□□ 0.02
ARHGEF9O43307 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF9O43307 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
ARHGEF9O43307 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ARHGEF9O43307 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF9O43307 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF9O43307 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.15■□□□□ 0.02
ARHGEF9O43307 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF9O43307 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ARHGEF9O43307 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF9O43307 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.15■□□□□ 0.02
ARHGEF9O43307 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.14■□□□□ 0.01
ARHGEF9O43307 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.14■□□□□ 0.01
ARHGEF9O43307 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.14■□□□□ 0.01
ARHGEF9O43307 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.14■□□□□ 0.01
ARHGEF9O43307 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ARHGEF9O43307 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ARHGEF9O43307 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ARHGEF9O43307 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ARHGEF9O43307 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.14■□□□□ 0.01
ARHGEF9O43307 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
ARHGEF9O43307 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
ARHGEF9O43307 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.14■□□□□ 0.01
ARHGEF9O43307 LAGE3P1-201ENST00000425356 484 ntBASIC15.14■□□□□ 0.01
ARHGEF9O43307 UNC93B6-202ENST00000528242 690 ntBASIC15.14■□□□□ 0.01
ARHGEF9O43307 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.14■□□□□ 0.01
ARHGEF9O43307 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.14■□□□□ 0.01
ARHGEF9O43307 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 AC107918.4-202ENST00000641623 219 ntBASIC15.14■□□□□ 0.01
ARHGEF9O43307 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.14■□□□□ 0.01
ARHGEF9O43307 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.14■□□□□ 0.01
ARHGEF9O43307 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
ARHGEF9O43307 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.14■□□□□ 0.01
ARHGEF9O43307 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ARHGEF9O43307 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.14■□□□□ 0.01
ARHGEF9O43307 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF9O43307 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms