Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRANK1O15050 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.66■□□□□ 0.26
TRANK1O15050 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRANK1O15050 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRANK1O15050 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRANK1O15050 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRANK1O15050 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.66■□□□□ 0.26
TRANK1O15050 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRANK1O15050 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.66■□□□□ 0.26
TRANK1O15050 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRANK1O15050 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRANK1O15050 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRANK1O15050 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRANK1O15050 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRANK1O15050 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRANK1O15050 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRANK1O15050 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.66■□□□□ 0.26
TRANK1O15050 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRANK1O15050 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRANK1O15050 FAM197Y7-201ENST00000432892 766 ntBASIC16.66■□□□□ 0.26
TRANK1O15050 SPTLC1P5-201ENST00000450718 252 ntBASIC16.66■□□□□ 0.26
TRANK1O15050 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.66■□□□□ 0.26
TRANK1O15050 SLED1-202ENST00000512051 380 ntBASIC16.66■□□□□ 0.26
TRANK1O15050 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRANK1O15050 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.66■□□□□ 0.26
TRANK1O15050 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.66■□□□□ 0.26
TRANK1O15050 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TRANK1O15050 FZD10-202ENST00000539839 3282 ntBASIC16.65■□□□□ 0.26
TRANK1O15050 AC141586.5-201ENST00000624546 2050 ntBASIC16.65■□□□□ 0.26
TRANK1O15050 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TRANK1O15050 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRANK1O15050 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRANK1O15050 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.65■□□□□ 0.26
TRANK1O15050 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.65■□□□□ 0.26
TRANK1O15050 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.65■□□□□ 0.26
TRANK1O15050 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.65■□□□□ 0.26
TRANK1O15050 MIR3907-201ENST00000579424 151 ntBASIC16.65■□□□□ 0.26
TRANK1O15050 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.65■□□□□ 0.26
TRANK1O15050 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRANK1O15050 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRANK1O15050 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.65■□□□□ 0.26
TRANK1O15050 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.65■□□□□ 0.26
TRANK1O15050 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.65■□□□□ 0.26
TRANK1O15050 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.65■□□□□ 0.26
TRANK1O15050 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRANK1O15050 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRANK1O15050 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
TRANK1O15050 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.65■□□□□ 0.26
TRANK1O15050 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRANK1O15050 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRANK1O15050 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRANK1O15050 AP000346.4-201ENST00000614827 381 ntBASIC16.65■□□□□ 0.26
TRANK1O15050 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRANK1O15050 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
TRANK1O15050 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRANK1O15050 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRANK1O15050 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRANK1O15050 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRANK1O15050 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRANK1O15050 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRANK1O15050 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRANK1O15050 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
TRANK1O15050 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.64■□□□□ 0.25
TRANK1O15050 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.64■□□□□ 0.25
TRANK1O15050 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.64■□□□□ 0.25
TRANK1O15050 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.64■□□□□ 0.25
TRANK1O15050 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.64■□□□□ 0.25
TRANK1O15050 ECM1P1-201ENST00000604092 1279 ntBASIC16.64■□□□□ 0.25
TRANK1O15050 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRANK1O15050 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
TRANK1O15050 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRANK1O15050 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRANK1O15050 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRANK1O15050 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.64■□□□□ 0.25
TRANK1O15050 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRANK1O15050 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRANK1O15050 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRANK1O15050 PTK2-225ENST00000520892 571 ntTSL 4 BASIC16.64■□□□□ 0.25
TRANK1O15050 AC022217.1-201ENST00000521069 738 ntBASIC16.64■□□□□ 0.25
TRANK1O15050 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRANK1O15050 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRANK1O15050 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRANK1O15050 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRANK1O15050 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRANK1O15050 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRANK1O15050 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRANK1O15050 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRANK1O15050 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRANK1O15050 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
TRANK1O15050 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRANK1O15050 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRANK1O15050 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.63■□□□□ 0.25
TRANK1O15050 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRANK1O15050 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRANK1O15050 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.63■□□□□ 0.25
TRANK1O15050 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.63■□□□□ 0.25
TRANK1O15050 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.63■□□□□ 0.25
TRANK1O15050 MAGEA5-201ENST00000446757 942 ntBASIC16.63■□□□□ 0.25
TRANK1O15050 HOMER2P2-201ENST00000451621 847 ntBASIC16.63■□□□□ 0.25
TRANK1O15050 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms