Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 PLAGL2-201ENST00000246229 5705 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 AC097637.2-201ENST00000624096 1997 ntBASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 ANXA11-202ENST00000372231 6720 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 GPR107-202ENST00000372406 7353 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC8.96□□□□□ -0.97
CHKB-CPT1BH3BT56 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 AL118506.1-201ENST00000601296 3082 ntBASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 GPX1P1-201ENST00000388829 606 ntBASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 OR2A1-AS1-204ENST00000470435 602 ntBASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 AL121832.2-201ENST00000610979 668 ntBASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 RTN3-206ENST00000377819 4937 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 AL133216.2-201ENST00000622550 7213 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 SPECC1L-204ENST00000437398 6674 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC8.96□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms