Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AC106881.1-201ENST00000605849 3329 ntBASIC17.24■□□□□ 0.35
RCCD1A6NED2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RCCD1A6NED2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.24■□□□□ 0.35
RCCD1A6NED2 PRSS29P-201ENST00000440800 595 ntBASIC17.24■□□□□ 0.35
RCCD1A6NED2 EMBP1-201ENST00000458200 901 ntBASIC17.24■□□□□ 0.35
RCCD1A6NED2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RCCD1A6NED2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RCCD1A6NED2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.24■□□□□ 0.35
RCCD1A6NED2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.24■□□□□ 0.35
RCCD1A6NED2 LINC01711-201ENST00000598340 967 ntBASIC17.24■□□□□ 0.35
RCCD1A6NED2 AL049840.3-201ENST00000602669 611 ntBASIC17.24■□□□□ 0.35
RCCD1A6NED2 FAM215A-202ENST00000632077 792 ntBASIC17.24■□□□□ 0.35
RCCD1A6NED2 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RCCD1A6NED2 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RCCD1A6NED2 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RCCD1A6NED2 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RCCD1A6NED2 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RCCD1A6NED2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RCCD1A6NED2 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.24■□□□□ 0.35
RCCD1A6NED2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
RCCD1A6NED2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.24■□□□□ 0.35
RCCD1A6NED2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RCCD1A6NED2 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RCCD1A6NED2 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.24■□□□□ 0.35
RCCD1A6NED2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RCCD1A6NED2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RCCD1A6NED2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.24■□□□□ 0.35
RCCD1A6NED2 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RCCD1A6NED2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RCCD1A6NED2 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RCCD1A6NED2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.23■□□□□ 0.35
RCCD1A6NED2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RCCD1A6NED2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
RCCD1A6NED2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.23■□□□□ 0.35
RCCD1A6NED2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RCCD1A6NED2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RCCD1A6NED2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.23■□□□□ 0.35
RCCD1A6NED2 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RCCD1A6NED2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RCCD1A6NED2 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RCCD1A6NED2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RCCD1A6NED2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.23■□□□□ 0.35
RCCD1A6NED2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.23■□□□□ 0.35
RCCD1A6NED2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.23■□□□□ 0.35
RCCD1A6NED2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.23■□□□□ 0.35
RCCD1A6NED2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RCCD1A6NED2 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.23■□□□□ 0.35
RCCD1A6NED2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RCCD1A6NED2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
RCCD1A6NED2 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RCCD1A6NED2 TCAF2P1-201ENST00000291129 2421 ntBASIC17.23■□□□□ 0.35
RCCD1A6NED2 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RCCD1A6NED2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
RCCD1A6NED2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RCCD1A6NED2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RCCD1A6NED2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RCCD1A6NED2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RCCD1A6NED2 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RCCD1A6NED2 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RCCD1A6NED2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
RCCD1A6NED2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.23■□□□□ 0.35
RCCD1A6NED2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RCCD1A6NED2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RCCD1A6NED2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RCCD1A6NED2 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.23■□□□□ 0.35
RCCD1A6NED2 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.23■□□□□ 0.35
RCCD1A6NED2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RCCD1A6NED2 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RCCD1A6NED2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RCCD1A6NED2 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RCCD1A6NED2 AC073439.1-201ENST00000624121 1774 ntBASIC17.23■□□□□ 0.35
RCCD1A6NED2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RCCD1A6NED2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RCCD1A6NED2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.22■□□□□ 0.35
RCCD1A6NED2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RCCD1A6NED2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RCCD1A6NED2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RCCD1A6NED2 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RCCD1A6NED2 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RCCD1A6NED2 AL589702.1-201ENST00000641229 1509 ntBASIC17.22■□□□□ 0.35
RCCD1A6NED2 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RCCD1A6NED2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RCCD1A6NED2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.22■□□□□ 0.35
RCCD1A6NED2 AC018892.3-201ENST00000623986 2499 ntBASIC17.22■□□□□ 0.35
RCCD1A6NED2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RCCD1A6NED2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RCCD1A6NED2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.22■□□□□ 0.35
RCCD1A6NED2 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC17.22■□□□□ 0.35
RCCD1A6NED2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.22■□□□□ 0.35
RCCD1A6NED2 GPX1P2-201ENST00000429271 606 ntBASIC17.22■□□□□ 0.35
RCCD1A6NED2 KRT18P67-201ENST00000432816 1264 ntBASIC17.22■□□□□ 0.35
RCCD1A6NED2 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RCCD1A6NED2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.22■□□□□ 0.35
RCCD1A6NED2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
RCCD1A6NED2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RCCD1A6NED2 MIR4751-201ENST00000578027 74 ntBASIC17.22■□□□□ 0.35
RCCD1A6NED2 AL009183.1-201ENST00000603760 355 ntBASIC17.22■□□□□ 0.35
RCCD1A6NED2 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RCCD1A6NED2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RCCD1A6NED2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms