Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC087641.1-201ENST00000557561 1021 ntBASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC091167.2-201ENST00000579581 588 ntBASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC099522.2-201ENST00000607001 744 ntBASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AL671710.1-201ENST00000610245 2349 ntBASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 LINC00628-201ENST00000628516 1289 ntBASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.08□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
TCRBV4S1A1TA0A5B7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
TCRBV4S1A1TA0A5B7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TCRBV4S1A1TA0A5B7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 GGT4P-201ENST00000623672 1708 ntBASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC006449.6-201ENST00000612330 2296 ntBASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 KRT8P48-201ENST00000515599 1220 ntBASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AL135744.1-201ENST00000565098 629 ntBASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AL009183.1-201ENST00000603760 355 ntBASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AKAP8P1-201ENST00000434743 1349 ntBASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.08□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SNX33P1-201ENST00000592116 1762 ntBASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 KRT8P39-201ENST00000396270 1433 ntBASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms