Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 TNRC18P3-201ENST00000441896 2691 ntBASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 Z97205.2-201ENST00000564697 1639 ntBASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 RN7SL399P-201ENST00000471648 279 ntBASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC187A0A096LP49 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC187A0A096LP49 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CCDC187A0A096LP49 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC187A0A096LP49 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC187A0A096LP49 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CCDC187A0A096LP49 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.27■□□□□ 0.04
CCDC187A0A096LP49 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC187A0A096LP49 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.27■□□□□ 0.04
CCDC187A0A096LP49 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC187A0A096LP49 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC187A0A096LP49 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.27■□□□□ 0.04
CCDC187A0A096LP49 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC187A0A096LP49 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC187A0A096LP49 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CCDC187A0A096LP49 AL162726.2-201ENST00000438986 1017 ntBASIC15.27■□□□□ 0.04
CCDC187A0A096LP49 CROCCP4-201ENST00000457096 498 ntBASIC15.27■□□□□ 0.04
CCDC187A0A096LP49 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC187A0A096LP49 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CCDC187A0A096LP49 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC187A0A096LP49 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC187A0A096LP49 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
CCDC187A0A096LP49 AC233724.13-201ENST00000598383 410 ntBASIC15.27■□□□□ 0.04
CCDC187A0A096LP49 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.27■□□□□ 0.04
CCDC187A0A096LP49 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC187A0A096LP49 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC187A0A096LP49 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC187A0A096LP49 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC187A0A096LP49 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC187A0A096LP49 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
CCDC187A0A096LP49 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC187A0A096LP49 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC187A0A096LP49 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CCDC187A0A096LP49 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC187A0A096LP49 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 AL442647.2-201ENST00000429864 857 ntBASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 USP32P1-208ENST00000506594 1164 ntBASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms