Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
HCFC2Q9Y5Z7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.06■■□□□ 1.6
HCFC2Q9Y5Z7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.06■■□□□ 1.6
HCFC2Q9Y5Z7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
HCFC2Q9Y5Z7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
HCFC2Q9Y5Z7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
HCFC2Q9Y5Z7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
HCFC2Q9Y5Z7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
HCFC2Q9Y5Z7 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.04■■□□□ 1.6
HCFC2Q9Y5Z7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.04■■□□□ 1.6
HCFC2Q9Y5Z7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.04■■□□□ 1.6
HCFC2Q9Y5Z7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.04■■□□□ 1.6
HCFC2Q9Y5Z7 AL512631.2-201ENST00000604634 923 ntBASIC25.04■■□□□ 1.6
HCFC2Q9Y5Z7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
HCFC2Q9Y5Z7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
HCFC2Q9Y5Z7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.03■■□□□ 1.6
HCFC2Q9Y5Z7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.03■■□□□ 1.6
HCFC2Q9Y5Z7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.03■■□□□ 1.6
HCFC2Q9Y5Z7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
HCFC2Q9Y5Z7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
HCFC2Q9Y5Z7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
HCFC2Q9Y5Z7 AF131216.4-201ENST00000638924 1588 ntBASIC25.01■■□□□ 1.59
HCFC2Q9Y5Z7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25■■□□□ 1.59
HCFC2Q9Y5Z7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
HCFC2Q9Y5Z7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25■■□□□ 1.59
HCFC2Q9Y5Z7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
HCFC2Q9Y5Z7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25■■□□□ 1.59
HCFC2Q9Y5Z7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25■■□□□ 1.59
HCFC2Q9Y5Z7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
HCFC2Q9Y5Z7 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.99■■□□□ 1.59
HCFC2Q9Y5Z7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.99■■□□□ 1.59
HCFC2Q9Y5Z7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.99■■□□□ 1.59
HCFC2Q9Y5Z7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.99■■□□□ 1.59
HCFC2Q9Y5Z7 AC133561.4-201ENST00000566112 224 ntBASIC24.99■■□□□ 1.59
HCFC2Q9Y5Z7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.99■■□□□ 1.59
HCFC2Q9Y5Z7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.99■■□□□ 1.59
HCFC2Q9Y5Z7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC24.99■■□□□ 1.59
HCFC2Q9Y5Z7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
HCFC2Q9Y5Z7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.98■■□□□ 1.59
HCFC2Q9Y5Z7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
HCFC2Q9Y5Z7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.98■■□□□ 1.59
HCFC2Q9Y5Z7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
HCFC2Q9Y5Z7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.98■■□□□ 1.59
HCFC2Q9Y5Z7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.98■■□□□ 1.59
HCFC2Q9Y5Z7 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.98■■□□□ 1.59
HCFC2Q9Y5Z7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
HCFC2Q9Y5Z7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
HCFC2Q9Y5Z7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
HCFC2Q9Y5Z7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
HCFC2Q9Y5Z7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC24.97■■□□□ 1.59
HCFC2Q9Y5Z7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.97■■□□□ 1.59
HCFC2Q9Y5Z7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
HCFC2Q9Y5Z7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
HCFC2Q9Y5Z7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.97■■□□□ 1.59
HCFC2Q9Y5Z7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
HCFC2Q9Y5Z7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.96■■□□□ 1.59
HCFC2Q9Y5Z7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
HCFC2Q9Y5Z7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
HCFC2Q9Y5Z7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
HCFC2Q9Y5Z7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
HCFC2Q9Y5Z7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
HCFC2Q9Y5Z7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
HCFC2Q9Y5Z7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
HCFC2Q9Y5Z7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
HCFC2Q9Y5Z7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.93■■□□□ 1.58
HCFC2Q9Y5Z7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.93■■□□□ 1.58
HCFC2Q9Y5Z7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
HCFC2Q9Y5Z7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
HCFC2Q9Y5Z7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
HCFC2Q9Y5Z7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
HCFC2Q9Y5Z7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
HCFC2Q9Y5Z7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
HCFC2Q9Y5Z7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
HCFC2Q9Y5Z7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
HCFC2Q9Y5Z7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
HCFC2Q9Y5Z7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
HCFC2Q9Y5Z7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.91■■□□□ 1.58
HCFC2Q9Y5Z7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
HCFC2Q9Y5Z7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.91■■□□□ 1.58
HCFC2Q9Y5Z7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
HCFC2Q9Y5Z7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HCFC2Q9Y5Z7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.9■■□□□ 1.58
HCFC2Q9Y5Z7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
HCFC2Q9Y5Z7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HCFC2Q9Y5Z7 FOXO3B-201ENST00000395675 1928 ntBASIC24.89■■□□□ 1.58
HCFC2Q9Y5Z7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.89■■□□□ 1.58
HCFC2Q9Y5Z7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
HCFC2Q9Y5Z7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.89■■□□□ 1.57
HCFC2Q9Y5Z7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.89■■□□□ 1.57
HCFC2Q9Y5Z7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
HCFC2Q9Y5Z7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC24.88■■□□□ 1.57
HCFC2Q9Y5Z7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.88■■□□□ 1.57
HCFC2Q9Y5Z7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.88■■□□□ 1.57
HCFC2Q9Y5Z7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
HCFC2Q9Y5Z7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
HCFC2Q9Y5Z7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
HCFC2Q9Y5Z7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.87■■□□□ 1.57
HCFC2Q9Y5Z7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.87■■□□□ 1.57
HCFC2Q9Y5Z7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
HCFC2Q9Y5Z7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC24.87■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms