Protein–RNA interactions for Protein: Q9Y5H6

PCDHA8, Protocadherin alpha-8, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8Q9Y5H6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHA8Q9Y5H6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHA8Q9Y5H6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
PCDHA8Q9Y5H6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHA8Q9Y5H6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
PCDHA8Q9Y5H6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHA8Q9Y5H6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHA8Q9Y5H6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHA8Q9Y5H6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHA8Q9Y5H6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHA8Q9Y5H6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHA8Q9Y5H6 SLC6A10P-202ENST00000431994 2058 ntBASIC27.14■■□□□ 1.94
PCDHA8Q9Y5H6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHA8Q9Y5H6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHA8Q9Y5H6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHA8Q9Y5H6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
PCDHA8Q9Y5H6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHA8Q9Y5H6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.93
PCDHA8Q9Y5H6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
PCDHA8Q9Y5H6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHA8Q9Y5H6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC27.13■■□□□ 1.93
PCDHA8Q9Y5H6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC27.12■■□□□ 1.93
PCDHA8Q9Y5H6 AC103724.3-201ENST00000564481 992 ntBASIC27.12■■□□□ 1.93
PCDHA8Q9Y5H6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC27.12■■□□□ 1.93
PCDHA8Q9Y5H6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHA8Q9Y5H6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC27.12■■□□□ 1.93
PCDHA8Q9Y5H6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHA8Q9Y5H6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC27.11■■□□□ 1.93
PCDHA8Q9Y5H6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHA8Q9Y5H6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHA8Q9Y5H6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PCDHA8Q9Y5H6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC27.1■■□□□ 1.93
PCDHA8Q9Y5H6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC27.1■■□□□ 1.93
PCDHA8Q9Y5H6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
PCDHA8Q9Y5H6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC27.1■■□□□ 1.93
PCDHA8Q9Y5H6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PCDHA8Q9Y5H6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
PCDHA8Q9Y5H6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHA8Q9Y5H6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHA8Q9Y5H6 AL451085.2-201ENST00000605085 799 ntBASIC27.09■■□□□ 1.93
PCDHA8Q9Y5H6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC27.09■■□□□ 1.93
PCDHA8Q9Y5H6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHA8Q9Y5H6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
PCDHA8Q9Y5H6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHA8Q9Y5H6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHA8Q9Y5H6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
PCDHA8Q9Y5H6 AC022616.5-201ENST00000518796 181 ntBASIC27.08■■□□□ 1.93
PCDHA8Q9Y5H6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC27.08■■□□□ 1.93
PCDHA8Q9Y5H6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
PCDHA8Q9Y5H6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHA8Q9Y5H6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHA8Q9Y5H6 FOXO3B-201ENST00000395675 1928 ntBASIC27.08■■□□□ 1.93
PCDHA8Q9Y5H6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
PCDHA8Q9Y5H6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHA8Q9Y5H6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC27.07■■□□□ 1.92
PCDHA8Q9Y5H6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC27.07■■□□□ 1.92
PCDHA8Q9Y5H6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHA8Q9Y5H6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
PCDHA8Q9Y5H6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHA8Q9Y5H6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC27.07■■□□□ 1.92
PCDHA8Q9Y5H6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC27.06■■□□□ 1.92
PCDHA8Q9Y5H6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC27.06■■□□□ 1.92
PCDHA8Q9Y5H6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHA8Q9Y5H6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHA8Q9Y5H6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHA8Q9Y5H6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHA8Q9Y5H6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHA8Q9Y5H6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHA8Q9Y5H6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHA8Q9Y5H6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHA8Q9Y5H6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
PCDHA8Q9Y5H6 AL592295.1-201ENST00000400984 884 ntBASIC27.05■■□□□ 1.92
PCDHA8Q9Y5H6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC27.05■■□□□ 1.92
PCDHA8Q9Y5H6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC27.05■■□□□ 1.92
PCDHA8Q9Y5H6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC27.05■■□□□ 1.92
PCDHA8Q9Y5H6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHA8Q9Y5H6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
PCDHA8Q9Y5H6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
PCDHA8Q9Y5H6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC27.04■■□□□ 1.92
PCDHA8Q9Y5H6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHA8Q9Y5H6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHA8Q9Y5H6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHA8Q9Y5H6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHA8Q9Y5H6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHA8Q9Y5H6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHA8Q9Y5H6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC27.03■■□□□ 1.92
PCDHA8Q9Y5H6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHA8Q9Y5H6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
PCDHA8Q9Y5H6 AL031848.2-201ENST00000607670 837 ntBASIC27.03■■□□□ 1.92
PCDHA8Q9Y5H6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHA8Q9Y5H6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC27.02■■□□□ 1.92
PCDHA8Q9Y5H6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHA8Q9Y5H6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHA8Q9Y5H6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHA8Q9Y5H6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHA8Q9Y5H6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC27.02■■□□□ 1.92
PCDHA8Q9Y5H6 AC022211.4-201ENST00000625094 2161 ntBASIC27.02■■□□□ 1.92
PCDHA8Q9Y5H6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHA8Q9Y5H6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
PCDHA8Q9Y5H6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms