Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
NINLQ9Y2I6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC32.63■■■□□ 2.81
NINLQ9Y2I6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC32.63■■■□□ 2.81
NINLQ9Y2I6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
NINLQ9Y2I6 AC097639.1-201ENST00000565519 1891 ntBASIC32.62■■■□□ 2.81
NINLQ9Y2I6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC32.62■■■□□ 2.81
NINLQ9Y2I6 AL356441.2-201ENST00000443009 864 ntBASIC32.62■■■□□ 2.81
NINLQ9Y2I6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC32.62■■■□□ 2.81
NINLQ9Y2I6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
NINLQ9Y2I6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC32.62■■■□□ 2.81
NINLQ9Y2I6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
NINLQ9Y2I6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
NINLQ9Y2I6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC32.61■■■□□ 2.81
NINLQ9Y2I6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC32.61■■■□□ 2.81
NINLQ9Y2I6 MIR4787-201ENST00000607364 84 ntBASIC32.61■■■□□ 2.81
NINLQ9Y2I6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC32.61■■■□□ 2.81
NINLQ9Y2I6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC32.61■■■□□ 2.81
NINLQ9Y2I6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC32.61■■■□□ 2.81
NINLQ9Y2I6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
NINLQ9Y2I6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
NINLQ9Y2I6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
NINLQ9Y2I6 AC092803.2-201ENST00000564287 1899 ntBASIC32.6■■■□□ 2.81
NINLQ9Y2I6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
NINLQ9Y2I6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
NINLQ9Y2I6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC32.6■■■□□ 2.81
NINLQ9Y2I6 GAK-223ENST00000628912 497 ntTSL 5 BASIC32.59■■■□□ 2.81
NINLQ9Y2I6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC32.59■■■□□ 2.81
NINLQ9Y2I6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
NINLQ9Y2I6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
NINLQ9Y2I6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
NINLQ9Y2I6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
NINLQ9Y2I6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC32.58■■■□□ 2.81
NINLQ9Y2I6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC32.58■■■□□ 2.81
NINLQ9Y2I6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
NINLQ9Y2I6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC32.58■■■□□ 2.81
NINLQ9Y2I6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC32.58■■■□□ 2.81
NINLQ9Y2I6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
NINLQ9Y2I6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
NINLQ9Y2I6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC32.57■■■□□ 2.8
NINLQ9Y2I6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
NINLQ9Y2I6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
NINLQ9Y2I6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC32.56■■■□□ 2.8
NINLQ9Y2I6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC32.56■■■□□ 2.8
NINLQ9Y2I6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC32.56■■■□□ 2.8
NINLQ9Y2I6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC32.55■■■□□ 2.8
NINLQ9Y2I6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC32.55■■■□□ 2.8
NINLQ9Y2I6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
NINLQ9Y2I6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
NINLQ9Y2I6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC32.54■■■□□ 2.8
NINLQ9Y2I6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC32.54■■■□□ 2.8
NINLQ9Y2I6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
NINLQ9Y2I6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
NINLQ9Y2I6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC32.53■■■□□ 2.8
NINLQ9Y2I6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC32.53■■■□□ 2.8
NINLQ9Y2I6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
NINLQ9Y2I6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
NINLQ9Y2I6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC32.52■■■□□ 2.8
NINLQ9Y2I6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC32.52■■■□□ 2.8
NINLQ9Y2I6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC32.52■■■□□ 2.8
NINLQ9Y2I6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC32.52■■■□□ 2.8
NINLQ9Y2I6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
NINLQ9Y2I6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
NINLQ9Y2I6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
NINLQ9Y2I6 UNC93B8-201ENST00000511903 705 ntBASIC32.51■■■□□ 2.79
NINLQ9Y2I6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
NINLQ9Y2I6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC32.51■■■□□ 2.79
NINLQ9Y2I6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC32.5■■■□□ 2.79
NINLQ9Y2I6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
NINLQ9Y2I6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC32.5■■■□□ 2.79
NINLQ9Y2I6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC32.5■■■□□ 2.79
NINLQ9Y2I6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC32.5■■■□□ 2.79
NINLQ9Y2I6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC32.5■■■□□ 2.79
NINLQ9Y2I6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC32.49■■■□□ 2.79
NINLQ9Y2I6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC32.49■■■□□ 2.79
NINLQ9Y2I6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
NINLQ9Y2I6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
NINLQ9Y2I6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC32.49■■■□□ 2.79
NINLQ9Y2I6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC32.48■■■□□ 2.79
NINLQ9Y2I6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC32.48■■■□□ 2.79
NINLQ9Y2I6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC32.48■■■□□ 2.79
NINLQ9Y2I6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC32.47■■■□□ 2.79
NINLQ9Y2I6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC32.47■■■□□ 2.79
NINLQ9Y2I6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
NINLQ9Y2I6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
NINLQ9Y2I6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC32.46■■■□□ 2.79
NINLQ9Y2I6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC32.46■■■□□ 2.79
NINLQ9Y2I6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
NINLQ9Y2I6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC32.45■■■□□ 2.79
NINLQ9Y2I6 AC092028.1-203ENST00000608262 953 ntBASIC32.45■■■□□ 2.79
NINLQ9Y2I6 AF131216.4-201ENST00000638924 1588 ntBASIC32.45■■■□□ 2.79
NINLQ9Y2I6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
NINLQ9Y2I6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
NINLQ9Y2I6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC32.45■■■□□ 2.78
NINLQ9Y2I6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC32.45■■■□□ 2.78
NINLQ9Y2I6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC32.45■■■□□ 2.78
NINLQ9Y2I6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
NINLQ9Y2I6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC32.45■■■□□ 2.78
NINLQ9Y2I6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC32.45■■■□□ 2.78
NINLQ9Y2I6 DUSP8P4-201ENST00000399538 1761 ntBASIC32.44■■■□□ 2.78
NINLQ9Y2I6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC32.44■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms