Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
HINT3Q9NQE9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.29■■□□□ 1
HINT3Q9NQE9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.29■■□□□ 1
HINT3Q9NQE9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HINT3Q9NQE9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.28■■□□□ 1
HINT3Q9NQE9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
HINT3Q9NQE9 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HINT3Q9NQE9 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.28■■□□□ 1
HINT3Q9NQE9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
HINT3Q9NQE9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.28■■□□□ 1
HINT3Q9NQE9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HINT3Q9NQE9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.28■■□□□ 1
HINT3Q9NQE9 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.28■■□□□ 1
HINT3Q9NQE9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HINT3Q9NQE9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.27■■□□□ 1
HINT3Q9NQE9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
HINT3Q9NQE9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
HINT3Q9NQE9 AL157400.5-201ENST00000507624 621 ntBASIC21.27■■□□□ 1
HINT3Q9NQE9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.27■■□□□ 1
HINT3Q9NQE9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.27■■□□□ 1
HINT3Q9NQE9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
HINT3Q9NQE9 RNF126P1-201ENST00000567452 1320 ntBASIC21.27■□□□□ 0.99
HINT3Q9NQE9 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.26■□□□□ 0.99
HINT3Q9NQE9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HINT3Q9NQE9 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HINT3Q9NQE9 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HINT3Q9NQE9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HINT3Q9NQE9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HINT3Q9NQE9 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
HINT3Q9NQE9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
HINT3Q9NQE9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HINT3Q9NQE9 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HINT3Q9NQE9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HINT3Q9NQE9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HINT3Q9NQE9 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HINT3Q9NQE9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HINT3Q9NQE9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HINT3Q9NQE9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HINT3Q9NQE9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HINT3Q9NQE9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.23■□□□□ 0.99
HINT3Q9NQE9 AC025884.2-201ENST00000553429 711 ntBASIC21.23■□□□□ 0.99
HINT3Q9NQE9 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HINT3Q9NQE9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HINT3Q9NQE9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.23■□□□□ 0.99
HINT3Q9NQE9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HINT3Q9NQE9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
HINT3Q9NQE9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.23■□□□□ 0.99
HINT3Q9NQE9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.23■□□□□ 0.99
HINT3Q9NQE9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HINT3Q9NQE9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
HINT3Q9NQE9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.23■□□□□ 0.99
HINT3Q9NQE9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HINT3Q9NQE9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.22■□□□□ 0.99
HINT3Q9NQE9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.22■□□□□ 0.99
HINT3Q9NQE9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
HINT3Q9NQE9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HINT3Q9NQE9 RARRES2P2-201ENST00000394842 485 ntBASIC21.22■□□□□ 0.99
HINT3Q9NQE9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HINT3Q9NQE9 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
HINT3Q9NQE9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HINT3Q9NQE9 AC141586.4-201ENST00000624558 1573 ntBASIC21.22■□□□□ 0.99
HINT3Q9NQE9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
HINT3Q9NQE9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HINT3Q9NQE9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HINT3Q9NQE9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HINT3Q9NQE9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HINT3Q9NQE9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HINT3Q9NQE9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.21■□□□□ 0.99
HINT3Q9NQE9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
HINT3Q9NQE9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HINT3Q9NQE9 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HINT3Q9NQE9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.21■□□□□ 0.99
HINT3Q9NQE9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.21■□□□□ 0.99
HINT3Q9NQE9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HINT3Q9NQE9 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HINT3Q9NQE9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HINT3Q9NQE9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.2■□□□□ 0.98
HINT3Q9NQE9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.2■□□□□ 0.98
HINT3Q9NQE9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HINT3Q9NQE9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HINT3Q9NQE9 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HINT3Q9NQE9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HINT3Q9NQE9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HINT3Q9NQE9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HINT3Q9NQE9 AC092296.2-201ENST00000589470 999 ntBASIC21.19■□□□□ 0.98
HINT3Q9NQE9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HINT3Q9NQE9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HINT3Q9NQE9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HINT3Q9NQE9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.19■□□□□ 0.98
HINT3Q9NQE9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HINT3Q9NQE9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.18■□□□□ 0.98
HINT3Q9NQE9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HINT3Q9NQE9 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
HINT3Q9NQE9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
HINT3Q9NQE9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.17■□□□□ 0.98
HINT3Q9NQE9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HINT3Q9NQE9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HINT3Q9NQE9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.17■□□□□ 0.98
HINT3Q9NQE9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
HINT3Q9NQE9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms