Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.74■□□□□ 0.75
Q9N2K0 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.74■□□□□ 0.75
Q9N2K0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Q9N2K0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Q9N2K0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.73■□□□□ 0.75
Q9N2K0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.73■□□□□ 0.75
Q9N2K0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Q9N2K0 AC141586.4-201ENST00000624558 1573 ntBASIC19.73■□□□□ 0.75
Q9N2K0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Q9N2K0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q9N2K0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.72■□□□□ 0.75
Q9N2K0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Q9N2K0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q9N2K0 ECEL1P2-201ENST00000461596 1295 ntBASIC19.72■□□□□ 0.75
Q9N2K0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.72■□□□□ 0.75
Q9N2K0 MIR7108-201ENST00000614319 87 ntBASIC19.72■□□□□ 0.75
Q9N2K0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Q9N2K0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q9N2K0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Q9N2K0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q9N2K0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q9N2K0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.71■□□□□ 0.75
Q9N2K0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Q9N2K0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.71■□□□□ 0.75
Q9N2K0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q9N2K0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q9N2K0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Q9N2K0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q9N2K0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q9N2K0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Q9N2K0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q9N2K0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.7■□□□□ 0.74
Q9N2K0 RP9P-202ENST00000450133 1212 ntBASIC19.7■□□□□ 0.74
Q9N2K0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q9N2K0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Q9N2K0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Q9N2K0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Q9N2K0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Q9N2K0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Q9N2K0 MIR639-201ENST00000384974 98 ntBASIC19.69■□□□□ 0.74
Q9N2K0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.69■□□□□ 0.74
Q9N2K0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.69■□□□□ 0.74
Q9N2K0 MIR6089-201ENST00000616698 64 ntBASIC19.69■□□□□ 0.74
Q9N2K0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Q9N2K0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q9N2K0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Q9N2K0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q9N2K0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Q9N2K0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q9N2K0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Q9N2K0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
Q9N2K0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q9N2K0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Q9N2K0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.67■□□□□ 0.74
Q9N2K0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q9N2K0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.67■□□□□ 0.74
Q9N2K0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q9N2K0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Q9N2K0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q9N2K0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q9N2K0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q9N2K0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q9N2K0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.66■□□□□ 0.74
Q9N2K0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.66■□□□□ 0.74
Q9N2K0 AC093536.1-201ENST00000569153 554 ntBASIC19.66■□□□□ 0.74
Q9N2K0 AC022413.1-201ENST00000624602 984 ntBASIC19.66■□□□□ 0.74
Q9N2K0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.66■□□□□ 0.74
Q9N2K0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q9N2K0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Q9N2K0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.66■□□□□ 0.74
Q9N2K0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.66■□□□□ 0.74
Q9N2K0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.66■□□□□ 0.74
Q9N2K0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.66■□□□□ 0.74
Q9N2K0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q9N2K0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.65■□□□□ 0.74
Q9N2K0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q9N2K0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.65■□□□□ 0.74
Q9N2K0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Q9N2K0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Q9N2K0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Q9N2K0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Q9N2K0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Q9N2K0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q9N2K0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.64■□□□□ 0.73
Q9N2K0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q9N2K0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q9N2K0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.64■□□□□ 0.73
Q9N2K0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q9N2K0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.64■□□□□ 0.73
Q9N2K0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Q9N2K0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q9N2K0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.64■□□□□ 0.73
Q9N2K0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Q9N2K0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Q9N2K0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Q9N2K0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q9N2K0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Q9N2K0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q9N2K0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.63■□□□□ 0.73
Q9N2K0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms