Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AC010980.1-201ENST00000587192 1142 ntBASIC20.56■□□□□ 0.88
CDH20Q9HBT6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH20Q9HBT6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH20Q9HBT6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH20Q9HBT6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH20Q9HBT6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH20Q9HBT6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH20Q9HBT6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH20Q9HBT6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH20Q9HBT6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.55■□□□□ 0.88
CDH20Q9HBT6 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.55■□□□□ 0.88
CDH20Q9HBT6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CDH20Q9HBT6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CDH20Q9HBT6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH20Q9HBT6 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDH20Q9HBT6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH20Q9HBT6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.54■□□□□ 0.88
CDH20Q9HBT6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDH20Q9HBT6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.54■□□□□ 0.88
CDH20Q9HBT6 LONRF2P2-201ENST00000439212 571 ntBASIC20.54■□□□□ 0.88
CDH20Q9HBT6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH20Q9HBT6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.54■□□□□ 0.88
CDH20Q9HBT6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH20Q9HBT6 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.53■□□□□ 0.88
CDH20Q9HBT6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.53■□□□□ 0.88
CDH20Q9HBT6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH20Q9HBT6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH20Q9HBT6 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CDH20Q9HBT6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH20Q9HBT6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDH20Q9HBT6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.51■□□□□ 0.87
CDH20Q9HBT6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.51■□□□□ 0.87
CDH20Q9HBT6 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.51■□□□□ 0.87
CDH20Q9HBT6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
CDH20Q9HBT6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.51■□□□□ 0.87
CDH20Q9HBT6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.51■□□□□ 0.87
CDH20Q9HBT6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH20Q9HBT6 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CDH20Q9HBT6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.51■□□□□ 0.87
CDH20Q9HBT6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH20Q9HBT6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CDH20Q9HBT6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH20Q9HBT6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH20Q9HBT6 AC019171.1-201ENST00000601251 1056 ntBASIC20.5■□□□□ 0.87
CDH20Q9HBT6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
CDH20Q9HBT6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.5■□□□□ 0.87
CDH20Q9HBT6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
CDH20Q9HBT6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH20Q9HBT6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH20Q9HBT6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH20Q9HBT6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.49■□□□□ 0.87
CDH20Q9HBT6 AL592295.1-201ENST00000400984 884 ntBASIC20.49■□□□□ 0.87
CDH20Q9HBT6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.49■□□□□ 0.87
CDH20Q9HBT6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.49■□□□□ 0.87
CDH20Q9HBT6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDH20Q9HBT6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.49■□□□□ 0.87
CDH20Q9HBT6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH20Q9HBT6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.49■□□□□ 0.87
CDH20Q9HBT6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH20Q9HBT6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDH20Q9HBT6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CDH20Q9HBT6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CDH20Q9HBT6 FOXO3B-201ENST00000395675 1928 ntBASIC20.49■□□□□ 0.87
CDH20Q9HBT6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.48■□□□□ 0.87
CDH20Q9HBT6 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH20Q9HBT6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH20Q9HBT6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDH20Q9HBT6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDH20Q9HBT6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.48■□□□□ 0.87
CDH20Q9HBT6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.47■□□□□ 0.87
CDH20Q9HBT6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH20Q9HBT6 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.47■□□□□ 0.87
CDH20Q9HBT6 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH20Q9HBT6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH20Q9HBT6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDH20Q9HBT6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH20Q9HBT6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH20Q9HBT6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.46■□□□□ 0.87
CDH20Q9HBT6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH20Q9HBT6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.46■□□□□ 0.87
CDH20Q9HBT6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH20Q9HBT6 YBX1P4-201ENST00000392794 808 ntBASIC20.46■□□□□ 0.87
CDH20Q9HBT6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.46■□□□□ 0.87
CDH20Q9HBT6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH20Q9HBT6 PVT1_1.1-201ENST00000615125 194 ntBASIC20.46■□□□□ 0.87
CDH20Q9HBT6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH20Q9HBT6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH20Q9HBT6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH20Q9HBT6 KRT8P33-201ENST00000508125 1423 ntBASIC20.45■□□□□ 0.86
CDH20Q9HBT6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDH20Q9HBT6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH20Q9HBT6 AC022616.5-201ENST00000518796 181 ntBASIC20.45■□□□□ 0.86
CDH20Q9HBT6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDH20Q9HBT6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH20Q9HBT6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH20Q9HBT6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH20Q9HBT6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH20Q9HBT6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CDH20Q9HBT6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.44■□□□□ 0.86
CDH20Q9HBT6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms