Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSBP3Q9BWW4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.65■□□□□ 0.74
SSBP3Q9BWW4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.65■□□□□ 0.74
SSBP3Q9BWW4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSBP3Q9BWW4 AC097639.1-201ENST00000565519 1891 ntBASIC19.65■□□□□ 0.74
SSBP3Q9BWW4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.64■□□□□ 0.74
SSBP3Q9BWW4 KRT18P24-201ENST00000344739 1156 ntBASIC19.64■□□□□ 0.73
SSBP3Q9BWW4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.64■□□□□ 0.73
SSBP3Q9BWW4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.64■□□□□ 0.73
SSBP3Q9BWW4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
SSBP3Q9BWW4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSBP3Q9BWW4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSBP3Q9BWW4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.64■□□□□ 0.73
SSBP3Q9BWW4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSBP3Q9BWW4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSBP3Q9BWW4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSBP3Q9BWW4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.63■□□□□ 0.73
SSBP3Q9BWW4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSBP3Q9BWW4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SSBP3Q9BWW4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SSBP3Q9BWW4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.63■□□□□ 0.73
SSBP3Q9BWW4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.62■□□□□ 0.73
SSBP3Q9BWW4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSBP3Q9BWW4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SSBP3Q9BWW4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.62■□□□□ 0.73
SSBP3Q9BWW4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSBP3Q9BWW4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSBP3Q9BWW4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSBP3Q9BWW4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.61■□□□□ 0.73
SSBP3Q9BWW4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSBP3Q9BWW4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
SSBP3Q9BWW4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.61■□□□□ 0.73
SSBP3Q9BWW4 AC120024.1-201ENST00000562672 995 ntBASIC19.61■□□□□ 0.73
SSBP3Q9BWW4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.61■□□□□ 0.73
SSBP3Q9BWW4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.61■□□□□ 0.73
SSBP3Q9BWW4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SSBP3Q9BWW4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SSBP3Q9BWW4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSBP3Q9BWW4 FOXO3B-201ENST00000395675 1928 ntBASIC19.61■□□□□ 0.73
SSBP3Q9BWW4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSBP3Q9BWW4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.6■□□□□ 0.73
SSBP3Q9BWW4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSBP3Q9BWW4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSBP3Q9BWW4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSBP3Q9BWW4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SSBP3Q9BWW4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.6■□□□□ 0.73
SSBP3Q9BWW4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSBP3Q9BWW4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSBP3Q9BWW4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSBP3Q9BWW4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSBP3Q9BWW4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SSBP3Q9BWW4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SSBP3Q9BWW4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.59■□□□□ 0.73
SSBP3Q9BWW4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSBP3Q9BWW4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSBP3Q9BWW4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
SSBP3Q9BWW4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSBP3Q9BWW4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSBP3Q9BWW4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSBP3Q9BWW4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSBP3Q9BWW4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSBP3Q9BWW4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SSBP3Q9BWW4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSBP3Q9BWW4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSBP3Q9BWW4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSBP3Q9BWW4 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.58■□□□□ 0.72
SSBP3Q9BWW4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.58■□□□□ 0.72
SSBP3Q9BWW4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSBP3Q9BWW4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSBP3Q9BWW4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSBP3Q9BWW4 BX664725.1-201ENST00000438252 379 ntBASIC19.57■□□□□ 0.72
SSBP3Q9BWW4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.57■□□□□ 0.72
SSBP3Q9BWW4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSBP3Q9BWW4 Z92544.1-202ENST00000571933 1220 ntBASIC19.57■□□□□ 0.72
SSBP3Q9BWW4 AC011551.1-201ENST00000614101 683 ntBASIC19.57■□□□□ 0.72
SSBP3Q9BWW4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSBP3Q9BWW4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSBP3Q9BWW4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.57■□□□□ 0.72
SSBP3Q9BWW4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSBP3Q9BWW4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SSBP3Q9BWW4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSBP3Q9BWW4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSBP3Q9BWW4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.56■□□□□ 0.72
SSBP3Q9BWW4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
SSBP3Q9BWW4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.56■□□□□ 0.72
SSBP3Q9BWW4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSBP3Q9BWW4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSBP3Q9BWW4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSBP3Q9BWW4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSBP3Q9BWW4 AC239859.2-201ENST00000444165 318 ntBASIC19.55■□□□□ 0.72
SSBP3Q9BWW4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.55■□□□□ 0.72
SSBP3Q9BWW4 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.55■□□□□ 0.72
SSBP3Q9BWW4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.55■□□□□ 0.72
SSBP3Q9BWW4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSBP3Q9BWW4 KRT125P-201ENST00000546827 989 ntBASIC19.55■□□□□ 0.72
SSBP3Q9BWW4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSBP3Q9BWW4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSBP3Q9BWW4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SSBP3Q9BWW4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.55■□□□□ 0.72
SSBP3Q9BWW4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms