Protein–RNA interactions for Protein: Q96SB8

SMC6, Structural maintenance of chromosomes protein 6, humanhuman

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6Q96SB8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.78■■□□□ 1.4
SMC6Q96SB8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMC6Q96SB8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMC6Q96SB8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMC6Q96SB8 DUX4L13-201ENST00000554103 1267 ntBASIC23.78■■□□□ 1.4
SMC6Q96SB8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.78■■□□□ 1.4
SMC6Q96SB8 DUX4L15-201ENST00000611059 1267 ntBASIC23.78■■□□□ 1.4
SMC6Q96SB8 DUX4L23-201ENST00000615195 1269 ntBASIC23.78■■□□□ 1.4
SMC6Q96SB8 DUX4L24-201ENST00000617576 1269 ntBASIC23.78■■□□□ 1.4
SMC6Q96SB8 DUX4L22-201ENST00000618238 1269 ntBASIC23.78■■□□□ 1.4
SMC6Q96SB8 DUX4L20-201ENST00000619712 1269 ntBASIC23.78■■□□□ 1.4
SMC6Q96SB8 DUX4L21-201ENST00000622058 1269 ntBASIC23.78■■□□□ 1.4
SMC6Q96SB8 DUX4L10-201ENST00000622460 1267 ntBASIC23.78■■□□□ 1.4
SMC6Q96SB8 DUX4L25-201ENST00000624915 1269 ntBASIC23.78■■□□□ 1.4
SMC6Q96SB8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMC6Q96SB8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMC6Q96SB8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMC6Q96SB8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMC6Q96SB8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMC6Q96SB8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMC6Q96SB8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.77■■□□□ 1.4
SMC6Q96SB8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SMC6Q96SB8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.77■■□□□ 1.4
SMC6Q96SB8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMC6Q96SB8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMC6Q96SB8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMC6Q96SB8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMC6Q96SB8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.76■■□□□ 1.39
SMC6Q96SB8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SMC6Q96SB8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMC6Q96SB8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMC6Q96SB8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMC6Q96SB8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.76■■□□□ 1.39
SMC6Q96SB8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
SMC6Q96SB8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SMC6Q96SB8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
SMC6Q96SB8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMC6Q96SB8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
SMC6Q96SB8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMC6Q96SB8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.75■■□□□ 1.39
SMC6Q96SB8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMC6Q96SB8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SMC6Q96SB8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SMC6Q96SB8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SMC6Q96SB8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMC6Q96SB8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.74■■□□□ 1.39
SMC6Q96SB8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMC6Q96SB8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMC6Q96SB8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.74■■□□□ 1.39
SMC6Q96SB8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SMC6Q96SB8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SMC6Q96SB8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SMC6Q96SB8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SMC6Q96SB8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.73■■□□□ 1.39
SMC6Q96SB8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SMC6Q96SB8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SMC6Q96SB8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SMC6Q96SB8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SMC6Q96SB8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.73■■□□□ 1.39
SMC6Q96SB8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
SMC6Q96SB8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.72■■□□□ 1.39
SMC6Q96SB8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMC6Q96SB8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMC6Q96SB8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMC6Q96SB8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SMC6Q96SB8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SMC6Q96SB8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMC6Q96SB8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SMC6Q96SB8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMC6Q96SB8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
SMC6Q96SB8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.72■■□□□ 1.39
SMC6Q96SB8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SMC6Q96SB8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
SMC6Q96SB8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.71■■□□□ 1.39
SMC6Q96SB8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
SMC6Q96SB8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SMC6Q96SB8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
SMC6Q96SB8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.7■■□□□ 1.39
SMC6Q96SB8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SMC6Q96SB8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SMC6Q96SB8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.7■■□□□ 1.38
SMC6Q96SB8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SMC6Q96SB8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SMC6Q96SB8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SMC6Q96SB8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
SMC6Q96SB8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.69■■□□□ 1.38
SMC6Q96SB8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
SMC6Q96SB8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMC6Q96SB8 DUX4L11-201ENST00000611504 1267 ntBASIC23.69■■□□□ 1.38
SMC6Q96SB8 DUX4L12-201ENST00000614593 1267 ntBASIC23.69■■□□□ 1.38
SMC6Q96SB8 DUX4L14-201ENST00000621227 1267 ntBASIC23.69■■□□□ 1.38
SMC6Q96SB8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMC6Q96SB8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SMC6Q96SB8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMC6Q96SB8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMC6Q96SB8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMC6Q96SB8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.68■■□□□ 1.38
SMC6Q96SB8 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SMC6Q96SB8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SMC6Q96SB8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms