Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
BBS4Q96RK4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
BBS4Q96RK4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.28■■□□□ 1.16
BBS4Q96RK4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.28■■□□□ 1.16
BBS4Q96RK4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.28■■□□□ 1.16
BBS4Q96RK4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
BBS4Q96RK4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
BBS4Q96RK4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
BBS4Q96RK4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
BBS4Q96RK4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
BBS4Q96RK4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
BBS4Q96RK4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
BBS4Q96RK4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.26■■□□□ 1.15
BBS4Q96RK4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
BBS4Q96RK4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.26■■□□□ 1.15
BBS4Q96RK4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
BBS4Q96RK4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.26■■□□□ 1.15
BBS4Q96RK4 SPCS2P3-201ENST00000500401 656 ntBASIC22.26■■□□□ 1.15
BBS4Q96RK4 ABHD17AP5-201ENST00000580133 923 ntBASIC22.26■■□□□ 1.15
BBS4Q96RK4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
BBS4Q96RK4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
BBS4Q96RK4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
BBS4Q96RK4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BBS4Q96RK4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.25■■□□□ 1.15
BBS4Q96RK4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BBS4Q96RK4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
BBS4Q96RK4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
BBS4Q96RK4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
BBS4Q96RK4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
BBS4Q96RK4 AP003733.4-201ENST00000623785 1697 ntBASIC22.24■■□□□ 1.15
BBS4Q96RK4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
BBS4Q96RK4 DUX4L9-201ENST00000449051 1259 ntBASIC22.24■■□□□ 1.15
BBS4Q96RK4 MIR6765-201ENST00000614092 87 ntBASIC22.24■■□□□ 1.15
BBS4Q96RK4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
BBS4Q96RK4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
BBS4Q96RK4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.23■■□□□ 1.15
BBS4Q96RK4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
BBS4Q96RK4 RPS2P7-201ENST00000447334 885 ntBASIC22.23■■□□□ 1.15
BBS4Q96RK4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.23■■□□□ 1.15
BBS4Q96RK4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
BBS4Q96RK4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
BBS4Q96RK4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.23■■□□□ 1.15
BBS4Q96RK4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
BBS4Q96RK4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
BBS4Q96RK4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
BBS4Q96RK4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
BBS4Q96RK4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
BBS4Q96RK4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
BBS4Q96RK4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
BBS4Q96RK4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.22■■□□□ 1.15
BBS4Q96RK4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
BBS4Q96RK4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
BBS4Q96RK4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
BBS4Q96RK4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.22■■□□□ 1.15
BBS4Q96RK4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
BBS4Q96RK4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
BBS4Q96RK4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
BBS4Q96RK4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
BBS4Q96RK4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
BBS4Q96RK4 FOXO3B-201ENST00000395675 1928 ntBASIC22.2■■□□□ 1.14
BBS4Q96RK4 KRT18P60-201ENST00000312876 1297 ntBASIC22.2■■□□□ 1.14
BBS4Q96RK4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
BBS4Q96RK4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.2■■□□□ 1.14
BBS4Q96RK4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
BBS4Q96RK4 AC129492.7-201ENST00000622992 756 ntBASIC22.2■■□□□ 1.14
BBS4Q96RK4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
BBS4Q96RK4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
BBS4Q96RK4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.2■■□□□ 1.14
BBS4Q96RK4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
BBS4Q96RK4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.19■■□□□ 1.14
BBS4Q96RK4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
BBS4Q96RK4 NTF6A-201ENST00000591175 560 ntBASIC22.19■■□□□ 1.14
BBS4Q96RK4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.19■■□□□ 1.14
BBS4Q96RK4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
BBS4Q96RK4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.19■■□□□ 1.14
BBS4Q96RK4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.19■■□□□ 1.14
BBS4Q96RK4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
BBS4Q96RK4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
BBS4Q96RK4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
BBS4Q96RK4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
BBS4Q96RK4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
BBS4Q96RK4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
BBS4Q96RK4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
BBS4Q96RK4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.18■■□□□ 1.14
BBS4Q96RK4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
BBS4Q96RK4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
BBS4Q96RK4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
BBS4Q96RK4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
BBS4Q96RK4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.17■■□□□ 1.14
BBS4Q96RK4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
BBS4Q96RK4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
BBS4Q96RK4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
BBS4Q96RK4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.16■■□□□ 1.14
BBS4Q96RK4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
BBS4Q96RK4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
BBS4Q96RK4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.15■■□□□ 1.14
BBS4Q96RK4 AL139125.2-201ENST00000623134 1869 ntBASIC22.15■■□□□ 1.14
BBS4Q96RK4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
BBS4Q96RK4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
BBS4Q96RK4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms