Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.29■□□□□ 0.52
DUX3Q96PT4 AC022616.5-201ENST00000518796 181 ntBASIC18.29■□□□□ 0.52
DUX3Q96PT4 AC120024.1-201ENST00000562672 995 ntBASIC18.29■□□□□ 0.52
DUX3Q96PT4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DUX3Q96PT4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
DUX3Q96PT4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DUX3Q96PT4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DUX3Q96PT4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
DUX3Q96PT4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
DUX3Q96PT4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.28■□□□□ 0.52
DUX3Q96PT4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DUX3Q96PT4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.28■□□□□ 0.52
DUX3Q96PT4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DUX3Q96PT4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.27■□□□□ 0.52
DUX3Q96PT4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DUX3Q96PT4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DUX3Q96PT4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
DUX3Q96PT4 AC131212.1-201ENST00000613771 668 ntBASIC18.27■□□□□ 0.52
DUX3Q96PT4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DUX3Q96PT4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.27■□□□□ 0.52
DUX3Q96PT4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
DUX3Q96PT4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.27■□□□□ 0.51
DUX3Q96PT4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
DUX3Q96PT4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DUX3Q96PT4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
DUX3Q96PT4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.26■□□□□ 0.51
DUX3Q96PT4 AC096887.2-201ENST00000623443 1957 ntBASIC18.26■□□□□ 0.51
DUX3Q96PT4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DUX3Q96PT4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.26■□□□□ 0.51
DUX3Q96PT4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DUX3Q96PT4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DUX3Q96PT4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
DUX3Q96PT4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
DUX3Q96PT4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DUX3Q96PT4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DUX3Q96PT4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DUX3Q96PT4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DUX3Q96PT4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
DUX3Q96PT4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.25■□□□□ 0.51
DUX3Q96PT4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DUX3Q96PT4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
DUX3Q96PT4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DUX3Q96PT4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DUX3Q96PT4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
DUX3Q96PT4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.25■□□□□ 0.51
DUX3Q96PT4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DUX3Q96PT4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DUX3Q96PT4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.25■□□□□ 0.51
DUX3Q96PT4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.24■□□□□ 0.51
DUX3Q96PT4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.24■□□□□ 0.51
DUX3Q96PT4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DUX3Q96PT4 KRT18P24-201ENST00000344739 1156 ntBASIC18.24■□□□□ 0.51
DUX3Q96PT4 AL592295.1-201ENST00000400984 884 ntBASIC18.24■□□□□ 0.51
DUX3Q96PT4 BX664725.1-201ENST00000438252 379 ntBASIC18.24■□□□□ 0.51
DUX3Q96PT4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.24■□□□□ 0.51
DUX3Q96PT4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.24■□□□□ 0.51
DUX3Q96PT4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DUX3Q96PT4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DUX3Q96PT4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.23■□□□□ 0.51
DUX3Q96PT4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.23■□□□□ 0.51
DUX3Q96PT4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DUX3Q96PT4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.23■□□□□ 0.51
DUX3Q96PT4 KRT125P-201ENST00000546827 989 ntBASIC18.23■□□□□ 0.51
DUX3Q96PT4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DUX3Q96PT4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DUX3Q96PT4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.23■□□□□ 0.51
DUX3Q96PT4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
DUX3Q96PT4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUX3Q96PT4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUX3Q96PT4 MIR4787-201ENST00000607364 84 ntBASIC18.22■□□□□ 0.51
DUX3Q96PT4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
DUX3Q96PT4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUX3Q96PT4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUX3Q96PT4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
DUX3Q96PT4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DUX3Q96PT4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DUX3Q96PT4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
DUX3Q96PT4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.21■□□□□ 0.51
DUX3Q96PT4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
DUX3Q96PT4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
DUX3Q96PT4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DUX3Q96PT4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DUX3Q96PT4 AC092803.2-201ENST00000564287 1899 ntBASIC18.21■□□□□ 0.51
DUX3Q96PT4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DUX3Q96PT4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DUX3Q96PT4 AL356441.2-201ENST00000443009 864 ntBASIC18.21■□□□□ 0.51
DUX3Q96PT4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.21■□□□□ 0.51
DUX3Q96PT4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.21■□□□□ 0.51
DUX3Q96PT4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DUX3Q96PT4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DUX3Q96PT4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DUX3Q96PT4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
DUX3Q96PT4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.2■□□□□ 0.5
DUX3Q96PT4 Z92544.1-202ENST00000571933 1220 ntBASIC18.2■□□□□ 0.5
DUX3Q96PT4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DUX3Q96PT4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DUX3Q96PT4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
DUX3Q96PT4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
DUX3Q96PT4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
DUX3Q96PT4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms