Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
APH1AQ96BI3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.91■□□□□ 0.94
APH1AQ96BI3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.91■□□□□ 0.94
APH1AQ96BI3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
APH1AQ96BI3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APH1AQ96BI3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
APH1AQ96BI3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APH1AQ96BI3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APH1AQ96BI3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APH1AQ96BI3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
APH1AQ96BI3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
APH1AQ96BI3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.89■□□□□ 0.94
APH1AQ96BI3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
APH1AQ96BI3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.89■□□□□ 0.93
APH1AQ96BI3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.89■□□□□ 0.93
APH1AQ96BI3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.89■□□□□ 0.93
APH1AQ96BI3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.89■□□□□ 0.93
APH1AQ96BI3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
APH1AQ96BI3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.89■□□□□ 0.93
APH1AQ96BI3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
APH1AQ96BI3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
APH1AQ96BI3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
APH1AQ96BI3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
APH1AQ96BI3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.88■□□□□ 0.93
APH1AQ96BI3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.88■□□□□ 0.93
APH1AQ96BI3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
APH1AQ96BI3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.87■□□□□ 0.93
APH1AQ96BI3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
APH1AQ96BI3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
APH1AQ96BI3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APH1AQ96BI3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.87■□□□□ 0.93
APH1AQ96BI3 AC103724.3-201ENST00000564481 992 ntBASIC20.87■□□□□ 0.93
APH1AQ96BI3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
APH1AQ96BI3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
APH1AQ96BI3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APH1AQ96BI3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APH1AQ96BI3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APH1AQ96BI3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
APH1AQ96BI3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
APH1AQ96BI3 AL031848.2-201ENST00000607670 837 ntBASIC20.86■□□□□ 0.93
APH1AQ96BI3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
APH1AQ96BI3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
APH1AQ96BI3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
APH1AQ96BI3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
APH1AQ96BI3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
APH1AQ96BI3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
APH1AQ96BI3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.85■□□□□ 0.93
APH1AQ96BI3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
APH1AQ96BI3 THA1P-201ENST00000590384 1145 ntBASIC20.84■□□□□ 0.93
APH1AQ96BI3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.84■□□□□ 0.93
APH1AQ96BI3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
APH1AQ96BI3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.84■□□□□ 0.93
APH1AQ96BI3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
APH1AQ96BI3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.84■□□□□ 0.93
APH1AQ96BI3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.84■□□□□ 0.93
APH1AQ96BI3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
APH1AQ96BI3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
APH1AQ96BI3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
APH1AQ96BI3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
APH1AQ96BI3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
APH1AQ96BI3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.83■□□□□ 0.93
APH1AQ96BI3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.83■□□□□ 0.93
APH1AQ96BI3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
APH1AQ96BI3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
APH1AQ96BI3 KRT18P24-201ENST00000344739 1156 ntBASIC20.82■□□□□ 0.92
APH1AQ96BI3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
APH1AQ96BI3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
APH1AQ96BI3 AC011551.1-201ENST00000614101 683 ntBASIC20.82■□□□□ 0.92
APH1AQ96BI3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
APH1AQ96BI3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
APH1AQ96BI3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APH1AQ96BI3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.81■□□□□ 0.92
APH1AQ96BI3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
APH1AQ96BI3 AC120024.1-201ENST00000562672 995 ntBASIC20.81■□□□□ 0.92
APH1AQ96BI3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
APH1AQ96BI3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APH1AQ96BI3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
APH1AQ96BI3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
APH1AQ96BI3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.8■□□□□ 0.92
APH1AQ96BI3 SLC6A10P-202ENST00000431994 2058 ntBASIC20.8■□□□□ 0.92
APH1AQ96BI3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APH1AQ96BI3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APH1AQ96BI3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.79■□□□□ 0.92
APH1AQ96BI3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.79■□□□□ 0.92
APH1AQ96BI3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
APH1AQ96BI3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
APH1AQ96BI3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.79■□□□□ 0.92
APH1AQ96BI3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
APH1AQ96BI3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
APH1AQ96BI3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.79■□□□□ 0.92
APH1AQ96BI3 AL451085.2-201ENST00000605085 799 ntBASIC20.79■□□□□ 0.92
APH1AQ96BI3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APH1AQ96BI3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
APH1AQ96BI3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APH1AQ96BI3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.78■□□□□ 0.92
APH1AQ96BI3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
APH1AQ96BI3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
APH1AQ96BI3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
APH1AQ96BI3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.77■□□□□ 0.92
APH1AQ96BI3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms