Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
VPS33AQ96AX1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
VPS33AQ96AX1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
VPS33AQ96AX1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
VPS33AQ96AX1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
VPS33AQ96AX1 AL157400.5-201ENST00000507624 621 ntBASIC22.58■■□□□ 1.21
VPS33AQ96AX1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.58■■□□□ 1.21
VPS33AQ96AX1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.58■■□□□ 1.21
VPS33AQ96AX1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
VPS33AQ96AX1 AC016575.1-201ENST00000607026 382 ntBASIC22.58■■□□□ 1.21
VPS33AQ96AX1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.58■■□□□ 1.21
VPS33AQ96AX1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
VPS33AQ96AX1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VPS33AQ96AX1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.57■■□□□ 1.2
VPS33AQ96AX1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VPS33AQ96AX1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS33AQ96AX1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.57■■□□□ 1.2
VPS33AQ96AX1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
VPS33AQ96AX1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS33AQ96AX1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS33AQ96AX1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.57■■□□□ 1.2
VPS33AQ96AX1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.57■■□□□ 1.2
VPS33AQ96AX1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.56■■□□□ 1.2
VPS33AQ96AX1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS33AQ96AX1 AC133561.1-201ENST00000568600 2415 ntBASIC22.56■■□□□ 1.2
VPS33AQ96AX1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.56■■□□□ 1.2
VPS33AQ96AX1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.56■■□□□ 1.2
VPS33AQ96AX1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
VPS33AQ96AX1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.56■■□□□ 1.2
VPS33AQ96AX1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS33AQ96AX1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
VPS33AQ96AX1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
VPS33AQ96AX1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.55■■□□□ 1.2
VPS33AQ96AX1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS33AQ96AX1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.55■■□□□ 1.2
VPS33AQ96AX1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
VPS33AQ96AX1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.55■■□□□ 1.2
VPS33AQ96AX1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS33AQ96AX1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS33AQ96AX1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
VPS33AQ96AX1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
VPS33AQ96AX1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS33AQ96AX1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
VPS33AQ96AX1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS33AQ96AX1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.54■■□□□ 1.2
VPS33AQ96AX1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS33AQ96AX1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS33AQ96AX1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS33AQ96AX1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
VPS33AQ96AX1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS33AQ96AX1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.53■■□□□ 1.2
VPS33AQ96AX1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
VPS33AQ96AX1 AC025884.2-201ENST00000553429 711 ntBASIC22.53■■□□□ 1.2
VPS33AQ96AX1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
VPS33AQ96AX1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.53■■□□□ 1.2
VPS33AQ96AX1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS33AQ96AX1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS33AQ96AX1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
VPS33AQ96AX1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
VPS33AQ96AX1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.53■■□□□ 1.2
VPS33AQ96AX1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.53■■□□□ 1.2
VPS33AQ96AX1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS33AQ96AX1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
VPS33AQ96AX1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
VPS33AQ96AX1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS33AQ96AX1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS33AQ96AX1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS33AQ96AX1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
VPS33AQ96AX1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS33AQ96AX1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.51■■□□□ 1.19
VPS33AQ96AX1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
VPS33AQ96AX1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
VPS33AQ96AX1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.51■■□□□ 1.19
VPS33AQ96AX1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
VPS33AQ96AX1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.51■■□□□ 1.19
VPS33AQ96AX1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
VPS33AQ96AX1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
VPS33AQ96AX1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
VPS33AQ96AX1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.51■■□□□ 1.19
VPS33AQ96AX1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS33AQ96AX1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS33AQ96AX1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS33AQ96AX1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS33AQ96AX1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
VPS33AQ96AX1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
VPS33AQ96AX1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
VPS33AQ96AX1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.5■■□□□ 1.19
VPS33AQ96AX1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS33AQ96AX1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
VPS33AQ96AX1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.5■■□□□ 1.19
VPS33AQ96AX1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS33AQ96AX1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS33AQ96AX1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS33AQ96AX1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
VPS33AQ96AX1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
VPS33AQ96AX1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
VPS33AQ96AX1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.49■■□□□ 1.19
VPS33AQ96AX1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS33AQ96AX1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
VPS33AQ96AX1 AC060814.1-201ENST00000554326 538 ntBASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms