Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCHCR1Q8TD31 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCHCR1Q8TD31 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.46■■□□□ 1.51
CCHCR1Q8TD31 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
CCHCR1Q8TD31 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCHCR1Q8TD31 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CCHCR1Q8TD31 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCHCR1Q8TD31 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.46■■□□□ 1.51
CCHCR1Q8TD31 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCHCR1Q8TD31 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCHCR1Q8TD31 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.51
CCHCR1Q8TD31 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.45■■□□□ 1.5
CCHCR1Q8TD31 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCHCR1Q8TD31 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
CCHCR1Q8TD31 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCHCR1Q8TD31 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCHCR1Q8TD31 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CCHCR1Q8TD31 LINC01124-201ENST00000409786 2117 ntBASIC24.45■■□□□ 1.5
CCHCR1Q8TD31 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CCHCR1Q8TD31 RP9P-202ENST00000450133 1212 ntBASIC24.45■■□□□ 1.5
CCHCR1Q8TD31 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CCHCR1Q8TD31 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CCHCR1Q8TD31 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCHCR1Q8TD31 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCHCR1Q8TD31 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
CCHCR1Q8TD31 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CCHCR1Q8TD31 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCHCR1Q8TD31 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.43■■□□□ 1.5
CCHCR1Q8TD31 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCHCR1Q8TD31 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCHCR1Q8TD31 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCHCR1Q8TD31 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.42■■□□□ 1.5
CCHCR1Q8TD31 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.42■■□□□ 1.5
CCHCR1Q8TD31 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCHCR1Q8TD31 ABHD17AP5-201ENST00000580133 923 ntBASIC24.42■■□□□ 1.5
CCHCR1Q8TD31 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCHCR1Q8TD31 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCHCR1Q8TD31 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.42■■□□□ 1.5
CCHCR1Q8TD31 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CCHCR1Q8TD31 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.42■■□□□ 1.5
CCHCR1Q8TD31 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCHCR1Q8TD31 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCHCR1Q8TD31 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.41■■□□□ 1.5
CCHCR1Q8TD31 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CCHCR1Q8TD31 AC012676.1-201ENST00000574705 1949 ntBASIC24.41■■□□□ 1.5
CCHCR1Q8TD31 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CCHCR1Q8TD31 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCHCR1Q8TD31 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCHCR1Q8TD31 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCHCR1Q8TD31 AC093536.1-201ENST00000569153 554 ntBASIC24.4■■□□□ 1.5
CCHCR1Q8TD31 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CCHCR1Q8TD31 AC141586.4-201ENST00000624558 1573 ntBASIC24.4■■□□□ 1.5
CCHCR1Q8TD31 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CCHCR1Q8TD31 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CCHCR1Q8TD31 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCHCR1Q8TD31 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCHCR1Q8TD31 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.39■■□□□ 1.5
CCHCR1Q8TD31 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.39■■□□□ 1.5
CCHCR1Q8TD31 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.39■■□□□ 1.49
CCHCR1Q8TD31 LINC00543-201ENST00000567234 1845 ntBASIC24.39■■□□□ 1.49
CCHCR1Q8TD31 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCHCR1Q8TD31 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
CCHCR1Q8TD31 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCHCR1Q8TD31 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCHCR1Q8TD31 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
CCHCR1Q8TD31 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
CCHCR1Q8TD31 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
CCHCR1Q8TD31 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCHCR1Q8TD31 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCHCR1Q8TD31 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.38■■□□□ 1.49
CCHCR1Q8TD31 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
CCHCR1Q8TD31 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCHCR1Q8TD31 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CCHCR1Q8TD31 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.37■■□□□ 1.49
CCHCR1Q8TD31 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
CCHCR1Q8TD31 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCHCR1Q8TD31 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCHCR1Q8TD31 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CCHCR1Q8TD31 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CCHCR1Q8TD31 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CCHCR1Q8TD31 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
CCHCR1Q8TD31 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CCHCR1Q8TD31 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
CCHCR1Q8TD31 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCHCR1Q8TD31 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
CCHCR1Q8TD31 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCHCR1Q8TD31 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CCHCR1Q8TD31 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
CCHCR1Q8TD31 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCHCR1Q8TD31 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
CCHCR1Q8TD31 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CCHCR1Q8TD31 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.35■■□□□ 1.49
CCHCR1Q8TD31 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
CCHCR1Q8TD31 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCHCR1Q8TD31 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.35■■□□□ 1.49
CCHCR1Q8TD31 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CCHCR1Q8TD31 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCHCR1Q8TD31 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
CCHCR1Q8TD31 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.34■■□□□ 1.49
CCHCR1Q8TD31 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms