Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC018755.3-202ENST00000596210 929 ntBASIC24.43■■□□□ 1.5
PCDH19Q8TAB3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDH19Q8TAB3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.43■■□□□ 1.5
PCDH19Q8TAB3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.43■■□□□ 1.5
PCDH19Q8TAB3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PCDH19Q8TAB3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
PCDH19Q8TAB3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
PCDH19Q8TAB3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.42■■□□□ 1.5
PCDH19Q8TAB3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.42■■□□□ 1.5
PCDH19Q8TAB3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PCDH19Q8TAB3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PCDH19Q8TAB3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PCDH19Q8TAB3 AL139125.2-201ENST00000623134 1869 ntBASIC24.41■■□□□ 1.5
PCDH19Q8TAB3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDH19Q8TAB3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.41■■□□□ 1.5
PCDH19Q8TAB3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH19Q8TAB3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH19Q8TAB3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH19Q8TAB3 RPS2P7-201ENST00000447334 885 ntBASIC24.4■■□□□ 1.5
PCDH19Q8TAB3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH19Q8TAB3 AC129492.7-201ENST00000622992 756 ntBASIC24.4■■□□□ 1.5
PCDH19Q8TAB3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH19Q8TAB3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH19Q8TAB3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PCDH19Q8TAB3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.39■■□□□ 1.49
PCDH19Q8TAB3 AP003733.4-201ENST00000623785 1697 ntBASIC24.39■■□□□ 1.49
PCDH19Q8TAB3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDH19Q8TAB3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
PCDH19Q8TAB3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
PCDH19Q8TAB3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDH19Q8TAB3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDH19Q8TAB3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
PCDH19Q8TAB3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
PCDH19Q8TAB3 MIR6765-201ENST00000614092 87 ntBASIC24.38■■□□□ 1.49
PCDH19Q8TAB3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.38■■□□□ 1.49
PCDH19Q8TAB3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.37■■□□□ 1.49
PCDH19Q8TAB3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PCDH19Q8TAB3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDH19Q8TAB3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDH19Q8TAB3 FOXO3B-201ENST00000395675 1928 ntBASIC24.37■■□□□ 1.49
PCDH19Q8TAB3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDH19Q8TAB3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.36■■□□□ 1.49
PCDH19Q8TAB3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.36■■□□□ 1.49
PCDH19Q8TAB3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDH19Q8TAB3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.36■■□□□ 1.49
PCDH19Q8TAB3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
PCDH19Q8TAB3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH19Q8TAB3 AC093323.1-202ENST00000635031 2045 ntBASIC24.35■■□□□ 1.49
PCDH19Q8TAB3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.35■■□□□ 1.49
PCDH19Q8TAB3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH19Q8TAB3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH19Q8TAB3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.35■■□□□ 1.49
PCDH19Q8TAB3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH19Q8TAB3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH19Q8TAB3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.34■■□□□ 1.49
PCDH19Q8TAB3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH19Q8TAB3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDH19Q8TAB3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
PCDH19Q8TAB3 TSPY13P-201ENST00000338964 914 ntBASIC24.34■■□□□ 1.49
PCDH19Q8TAB3 AC004987.1-201ENST00000428627 508 ntBASIC24.34■■□□□ 1.49
PCDH19Q8TAB3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.34■■□□□ 1.49
PCDH19Q8TAB3 AC087393.1-201ENST00000582896 145 ntBASIC24.34■■□□□ 1.49
PCDH19Q8TAB3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDH19Q8TAB3 MIR6089-201ENST00000616698 64 ntBASIC24.34■■□□□ 1.49
PCDH19Q8TAB3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH19Q8TAB3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
PCDH19Q8TAB3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH19Q8TAB3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDH19Q8TAB3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH19Q8TAB3 ATP5G2P3-201ENST00000429083 425 ntBASIC24.33■■□□□ 1.49
PCDH19Q8TAB3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDH19Q8TAB3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDH19Q8TAB3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.48
PCDH19Q8TAB3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH19Q8TAB3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH19Q8TAB3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH19Q8TAB3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH19Q8TAB3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH19Q8TAB3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH19Q8TAB3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDH19Q8TAB3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH19Q8TAB3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH19Q8TAB3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDH19Q8TAB3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH19Q8TAB3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
PCDH19Q8TAB3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH19Q8TAB3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH19Q8TAB3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.31■■□□□ 1.48
PCDH19Q8TAB3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH19Q8TAB3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDH19Q8TAB3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH19Q8TAB3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH19Q8TAB3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH19Q8TAB3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH19Q8TAB3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDH19Q8TAB3 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.3■■□□□ 1.48
PCDH19Q8TAB3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH19Q8TAB3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH19Q8TAB3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH19Q8TAB3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms