Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
SMC5Q8IY18 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
SMC5Q8IY18 AC133552.2-201ENST00000619106 1032 ntBASIC29.37■■■□□ 2.29
SMC5Q8IY18 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
SMC5Q8IY18 LSR-205ENST00000427250 1606 ntTSL 2 BASIC29.37■■■□□ 2.29
SMC5Q8IY18 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC29.37■■■□□ 2.29
SMC5Q8IY18 THRA-202ENST00000394121 2260 ntTSL 2 BASIC29.37■■■□□ 2.29
SMC5Q8IY18 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SMC5Q8IY18 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SMC5Q8IY18 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC29.35■■■□□ 2.29
SMC5Q8IY18 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC29.35■■■□□ 2.29
SMC5Q8IY18 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC29.35■■■□□ 2.29
SMC5Q8IY18 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SMC5Q8IY18 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SMC5Q8IY18 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC29.35■■■□□ 2.29
SMC5Q8IY18 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
SMC5Q8IY18 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC29.35■■■□□ 2.29
SMC5Q8IY18 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
SMC5Q8IY18 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SMC5Q8IY18 KRT18P10-201ENST00000388836 1287 ntBASIC29.34■■■□□ 2.29
SMC5Q8IY18 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
SMC5Q8IY18 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SMC5Q8IY18 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
SMC5Q8IY18 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC29.34■■■□□ 2.29
SMC5Q8IY18 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC29.34■■■□□ 2.29
SMC5Q8IY18 LINC00543-201ENST00000567234 1845 ntBASIC29.34■■■□□ 2.29
SMC5Q8IY18 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
SMC5Q8IY18 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SMC5Q8IY18 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SMC5Q8IY18 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
SMC5Q8IY18 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC29.32■■■□□ 2.28
SMC5Q8IY18 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC29.32■■■□□ 2.28
SMC5Q8IY18 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SMC5Q8IY18 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SMC5Q8IY18 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SMC5Q8IY18 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SMC5Q8IY18 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SMC5Q8IY18 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SMC5Q8IY18 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SMC5Q8IY18 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SMC5Q8IY18 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SMC5Q8IY18 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC29.3■■■□□ 2.28
SMC5Q8IY18 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
SMC5Q8IY18 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC29.3■■■□□ 2.28
SMC5Q8IY18 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
SMC5Q8IY18 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC29.3■■■□□ 2.28
SMC5Q8IY18 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
SMC5Q8IY18 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC29.3■■■□□ 2.28
SMC5Q8IY18 TMEM202-AS1-202ENST00000565181 2325 ntBASIC29.29■■■□□ 2.28
SMC5Q8IY18 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC29.29■■■□□ 2.28
SMC5Q8IY18 FOXO3B-201ENST00000395675 1928 ntBASIC29.29■■■□□ 2.28
SMC5Q8IY18 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
SMC5Q8IY18 SPCS2P3-201ENST00000500401 656 ntBASIC29.28■■■□□ 2.28
SMC5Q8IY18 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
SMC5Q8IY18 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
SMC5Q8IY18 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
SMC5Q8IY18 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC29.27■■■□□ 2.28
SMC5Q8IY18 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SMC5Q8IY18 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC29.27■■■□□ 2.28
SMC5Q8IY18 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
SMC5Q8IY18 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
SMC5Q8IY18 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SMC5Q8IY18 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
SMC5Q8IY18 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SMC5Q8IY18 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC29.26■■■□□ 2.28
SMC5Q8IY18 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SMC5Q8IY18 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
SMC5Q8IY18 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC29.26■■■□□ 2.27
SMC5Q8IY18 AL592293.1-201ENST00000502889 1188 ntBASIC29.26■■■□□ 2.27
SMC5Q8IY18 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.26■■■□□ 2.27
SMC5Q8IY18 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC29.26■■■□□ 2.27
SMC5Q8IY18 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
SMC5Q8IY18 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
SMC5Q8IY18 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
SMC5Q8IY18 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SMC5Q8IY18 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SMC5Q8IY18 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SMC5Q8IY18 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
SMC5Q8IY18 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC29.25■■■□□ 2.27
SMC5Q8IY18 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC29.25■■■□□ 2.27
SMC5Q8IY18 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SMC5Q8IY18 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
SMC5Q8IY18 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC29.24■■■□□ 2.27
SMC5Q8IY18 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SMC5Q8IY18 AC141586.4-201ENST00000624558 1573 ntBASIC29.24■■■□□ 2.27
SMC5Q8IY18 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC29.24■■■□□ 2.27
SMC5Q8IY18 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SMC5Q8IY18 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SMC5Q8IY18 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC29.24■■■□□ 2.27
SMC5Q8IY18 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC29.24■■■□□ 2.27
SMC5Q8IY18 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SMC5Q8IY18 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
SMC5Q8IY18 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
SMC5Q8IY18 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
SMC5Q8IY18 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC29.23■■■□□ 2.27
SMC5Q8IY18 RARRES2P2-201ENST00000394842 485 ntBASIC29.23■■■□□ 2.27
SMC5Q8IY18 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
SMC5Q8IY18 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
SMC5Q8IY18 HYI-213ENST00000583037 1322 ntTSL 5 BASIC29.22■■■□□ 2.27
SMC5Q8IY18 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC29.22■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms