Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.48■■□□□ 1.83
TRIM50Q86XT4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM50Q86XT4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.48■■□□□ 1.83
TRIM50Q86XT4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.48■■□□□ 1.83
TRIM50Q86XT4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM50Q86XT4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
TRIM50Q86XT4 TSPY9P-201ENST00000440215 945 ntBASIC26.47■■□□□ 1.83
TRIM50Q86XT4 TSPY11P-201ENST00000442607 1045 ntBASIC26.47■■□□□ 1.83
TRIM50Q86XT4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.47■■□□□ 1.83
TRIM50Q86XT4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.47■■□□□ 1.83
TRIM50Q86XT4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TRIM50Q86XT4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
TRIM50Q86XT4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TRIM50Q86XT4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
TRIM50Q86XT4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.46■■□□□ 1.83
TRIM50Q86XT4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
TRIM50Q86XT4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TRIM50Q86XT4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.46■■□□□ 1.83
TRIM50Q86XT4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.45■■□□□ 1.82
TRIM50Q86XT4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.45■■□□□ 1.82
TRIM50Q86XT4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TRIM50Q86XT4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.45■■□□□ 1.82
TRIM50Q86XT4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TRIM50Q86XT4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TRIM50Q86XT4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TRIM50Q86XT4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
TRIM50Q86XT4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM50Q86XT4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.44■■□□□ 1.82
TRIM50Q86XT4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM50Q86XT4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.44■■□□□ 1.82
TRIM50Q86XT4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.44■■□□□ 1.82
TRIM50Q86XT4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.44■■□□□ 1.82
TRIM50Q86XT4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.44■■□□□ 1.82
TRIM50Q86XT4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.44■■□□□ 1.82
TRIM50Q86XT4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM50Q86XT4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM50Q86XT4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM50Q86XT4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM50Q86XT4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.43■■□□□ 1.82
TRIM50Q86XT4 FOXO3B-201ENST00000395675 1928 ntBASIC26.43■■□□□ 1.82
TRIM50Q86XT4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TRIM50Q86XT4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TRIM50Q86XT4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.43■■□□□ 1.82
TRIM50Q86XT4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
TRIM50Q86XT4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.43■■□□□ 1.82
TRIM50Q86XT4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.43■■□□□ 1.82
TRIM50Q86XT4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.43■■□□□ 1.82
TRIM50Q86XT4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.43■■□□□ 1.82
TRIM50Q86XT4 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.43■■□□□ 1.82
TRIM50Q86XT4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
TRIM50Q86XT4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
TRIM50Q86XT4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM50Q86XT4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.42■■□□□ 1.82
TRIM50Q86XT4 KRT16P3-201ENST00000439127 1283 ntBASIC26.42■■□□□ 1.82
TRIM50Q86XT4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.42■■□□□ 1.82
TRIM50Q86XT4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM50Q86XT4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
TRIM50Q86XT4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.41■■□□□ 1.82
TRIM50Q86XT4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
TRIM50Q86XT4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM50Q86XT4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.41■■□□□ 1.82
TRIM50Q86XT4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM50Q86XT4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.41■■□□□ 1.82
TRIM50Q86XT4 AC011551.1-201ENST00000614101 683 ntBASIC26.41■■□□□ 1.82
TRIM50Q86XT4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM50Q86XT4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
TRIM50Q86XT4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.41■■□□□ 1.82
TRIM50Q86XT4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TRIM50Q86XT4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TRIM50Q86XT4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
TRIM50Q86XT4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TRIM50Q86XT4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.39■■□□□ 1.82
TRIM50Q86XT4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.39■■□□□ 1.82
TRIM50Q86XT4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
TRIM50Q86XT4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM50Q86XT4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM50Q86XT4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.38■■□□□ 1.81
TRIM50Q86XT4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.38■■□□□ 1.81
TRIM50Q86XT4 AC092028.1-203ENST00000608262 953 ntBASIC26.38■■□□□ 1.81
TRIM50Q86XT4 AC010501.1-201ENST00000606270 1962 ntBASIC26.38■■□□□ 1.81
TRIM50Q86XT4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.37■■□□□ 1.81
TRIM50Q86XT4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM50Q86XT4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.37■■□□□ 1.81
TRIM50Q86XT4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
TRIM50Q86XT4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM50Q86XT4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM50Q86XT4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
TRIM50Q86XT4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TRIM50Q86XT4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.36■■□□□ 1.81
TRIM50Q86XT4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
TRIM50Q86XT4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TRIM50Q86XT4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TRIM50Q86XT4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.35■■□□□ 1.81
TRIM50Q86XT4 AC097639.1-201ENST00000565519 1891 ntBASIC26.35■■□□□ 1.81
TRIM50Q86XT4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
TRIM50Q86XT4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM50Q86XT4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM50Q86XT4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM50Q86XT4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM50Q86XT4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 159.4 ms