Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC28Q86X40 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LRRC28Q86X40 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC28Q86X40 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC28Q86X40 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.87■□□□□ 0.93
LRRC28Q86X40 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.87■□□□□ 0.93
LRRC28Q86X40 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC28Q86X40 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC28Q86X40 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC28Q86X40 AC092296.2-201ENST00000589470 999 ntBASIC20.86■□□□□ 0.93
LRRC28Q86X40 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC28Q86X40 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC28Q86X40 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC28Q86X40 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC28Q86X40 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC28Q86X40 AL359258.2-201ENST00000564063 1566 ntBASIC20.85■□□□□ 0.93
LRRC28Q86X40 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC28Q86X40 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.85■□□□□ 0.93
LRRC28Q86X40 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC28Q86X40 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
LRRC28Q86X40 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC28Q86X40 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC28Q86X40 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC28Q86X40 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.84■□□□□ 0.93
LRRC28Q86X40 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC28Q86X40 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.84■□□□□ 0.93
LRRC28Q86X40 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC28Q86X40 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC28Q86X40 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC28Q86X40 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.83■□□□□ 0.93
LRRC28Q86X40 ECEL1P2-201ENST00000461596 1295 ntBASIC20.83■□□□□ 0.93
LRRC28Q86X40 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRRC28Q86X40 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.83■□□□□ 0.92
LRRC28Q86X40 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRRC28Q86X40 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
LRRC28Q86X40 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC28Q86X40 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC28Q86X40 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.82■□□□□ 0.92
LRRC28Q86X40 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC28Q86X40 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.82■□□□□ 0.92
LRRC28Q86X40 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC28Q86X40 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
LRRC28Q86X40 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LRRC28Q86X40 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC28Q86X40 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.81■□□□□ 0.92
LRRC28Q86X40 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
LRRC28Q86X40 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC28Q86X40 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC28Q86X40 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
LRRC28Q86X40 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.81■□□□□ 0.92
LRRC28Q86X40 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC28Q86X40 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.81■□□□□ 0.92
LRRC28Q86X40 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC28Q86X40 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC28Q86X40 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC28Q86X40 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC28Q86X40 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC28Q86X40 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC28Q86X40 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.79■□□□□ 0.92
LRRC28Q86X40 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC28Q86X40 DUSP8P5-201ENST00000422884 1815 ntBASIC20.79■□□□□ 0.92
LRRC28Q86X40 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC28Q86X40 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC28Q86X40 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.79■□□□□ 0.92
LRRC28Q86X40 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC28Q86X40 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC28Q86X40 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC28Q86X40 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.78■□□□□ 0.92
LRRC28Q86X40 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC28Q86X40 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC28Q86X40 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.78■□□□□ 0.92
LRRC28Q86X40 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
LRRC28Q86X40 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.77■□□□□ 0.92
LRRC28Q86X40 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC28Q86X40 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC28Q86X40 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.77■□□□□ 0.92
LRRC28Q86X40 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC28Q86X40 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC28Q86X40 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.77■□□□□ 0.92
LRRC28Q86X40 AL157400.5-201ENST00000507624 621 ntBASIC20.77■□□□□ 0.92
LRRC28Q86X40 ABHD17AP5-201ENST00000580133 923 ntBASIC20.77■□□□□ 0.92
LRRC28Q86X40 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.77■□□□□ 0.92
LRRC28Q86X40 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC28Q86X40 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.77■□□□□ 0.92
LRRC28Q86X40 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LRRC28Q86X40 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC28Q86X40 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.76■□□□□ 0.91
LRRC28Q86X40 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC28Q86X40 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
LRRC28Q86X40 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC28Q86X40 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
LRRC28Q86X40 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.76■□□□□ 0.91
LRRC28Q86X40 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC28Q86X40 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC28Q86X40 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC28Q86X40 AC141586.4-201ENST00000624558 1573 ntBASIC20.76■□□□□ 0.91
LRRC28Q86X40 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC28Q86X40 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LRRC28Q86X40 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC28Q86X40 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms