Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 FOXO3B-201ENST00000395675 1928 ntBASIC30.13■■■□□ 2.41
COPS6Q7L5N1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
COPS6Q7L5N1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC30.12■■■□□ 2.41
COPS6Q7L5N1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
COPS6Q7L5N1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
COPS6Q7L5N1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC30.12■■■□□ 2.41
COPS6Q7L5N1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.12■■■□□ 2.41
COPS6Q7L5N1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.12■■■□□ 2.41
COPS6Q7L5N1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
COPS6Q7L5N1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC30.11■■■□□ 2.41
COPS6Q7L5N1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC30.11■■■□□ 2.41
COPS6Q7L5N1 GRAMD4P7-201ENST00000578182 1232 ntBASIC30.11■■■□□ 2.41
COPS6Q7L5N1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
COPS6Q7L5N1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
COPS6Q7L5N1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
COPS6Q7L5N1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC30.1■■■□□ 2.41
COPS6Q7L5N1 GAK-223ENST00000628912 497 ntTSL 5 BASIC30.1■■■□□ 2.41
COPS6Q7L5N1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.1■■■□□ 2.41
COPS6Q7L5N1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
COPS6Q7L5N1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
COPS6Q7L5N1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC30.1■■■□□ 2.41
COPS6Q7L5N1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
COPS6Q7L5N1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC30.09■■■□□ 2.41
COPS6Q7L5N1 AC010501.1-201ENST00000606270 1962 ntBASIC30.09■■■□□ 2.41
COPS6Q7L5N1 AC011551.1-201ENST00000614101 683 ntBASIC30.09■■■□□ 2.41
COPS6Q7L5N1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
COPS6Q7L5N1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
COPS6Q7L5N1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
COPS6Q7L5N1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
COPS6Q7L5N1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
COPS6Q7L5N1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC30.08■■■□□ 2.41
COPS6Q7L5N1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.08■■■□□ 2.41
COPS6Q7L5N1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC30.08■■■□□ 2.41
COPS6Q7L5N1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
COPS6Q7L5N1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
COPS6Q7L5N1 AC097639.1-201ENST00000565519 1891 ntBASIC30.08■■■□□ 2.41
COPS6Q7L5N1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
COPS6Q7L5N1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
COPS6Q7L5N1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC30.07■■■□□ 2.4
COPS6Q7L5N1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC30.07■■■□□ 2.4
COPS6Q7L5N1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
COPS6Q7L5N1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
COPS6Q7L5N1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
COPS6Q7L5N1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC30.06■■■□□ 2.4
COPS6Q7L5N1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
COPS6Q7L5N1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.06■■■□□ 2.4
COPS6Q7L5N1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
COPS6Q7L5N1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC30.05■■■□□ 2.4
COPS6Q7L5N1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC30.05■■■□□ 2.4
COPS6Q7L5N1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC30.05■■■□□ 2.4
COPS6Q7L5N1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
COPS6Q7L5N1 AC092803.2-201ENST00000564287 1899 ntBASIC30.05■■■□□ 2.4
COPS6Q7L5N1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC30.05■■■□□ 2.4
COPS6Q7L5N1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
COPS6Q7L5N1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
COPS6Q7L5N1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
COPS6Q7L5N1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC30.04■■■□□ 2.4
COPS6Q7L5N1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC30.04■■■□□ 2.4
COPS6Q7L5N1 TSPY9P-201ENST00000440215 945 ntBASIC30.04■■■□□ 2.4
COPS6Q7L5N1 TSPY11P-201ENST00000442607 1045 ntBASIC30.04■■■□□ 2.4
COPS6Q7L5N1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC30.04■■■□□ 2.4
COPS6Q7L5N1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC30.04■■■□□ 2.4
COPS6Q7L5N1 AC092028.1-203ENST00000608262 953 ntBASIC30.04■■■□□ 2.4
COPS6Q7L5N1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
COPS6Q7L5N1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC30.03■■■□□ 2.4
COPS6Q7L5N1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
COPS6Q7L5N1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC30.03■■■□□ 2.4
COPS6Q7L5N1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC30.03■■■□□ 2.4
COPS6Q7L5N1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
COPS6Q7L5N1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC30.02■■■□□ 2.4
COPS6Q7L5N1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
COPS6Q7L5N1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC30.02■■■□□ 2.4
COPS6Q7L5N1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
COPS6Q7L5N1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
COPS6Q7L5N1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC30.02■■■□□ 2.4
COPS6Q7L5N1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
COPS6Q7L5N1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
COPS6Q7L5N1 KRT16P3-201ENST00000439127 1283 ntBASIC30.01■■■□□ 2.39
COPS6Q7L5N1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC30.01■■■□□ 2.39
COPS6Q7L5N1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC30.01■■■□□ 2.39
COPS6Q7L5N1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
COPS6Q7L5N1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
COPS6Q7L5N1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
COPS6Q7L5N1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
COPS6Q7L5N1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30■■■□□ 2.39
COPS6Q7L5N1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
COPS6Q7L5N1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC30■■■□□ 2.39
COPS6Q7L5N1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC30■■■□□ 2.39
COPS6Q7L5N1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC30■■■□□ 2.39
COPS6Q7L5N1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
COPS6Q7L5N1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC30■■■□□ 2.39
COPS6Q7L5N1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
COPS6Q7L5N1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
COPS6Q7L5N1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC29.99■■■□□ 2.39
COPS6Q7L5N1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC29.99■■■□□ 2.39
COPS6Q7L5N1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
COPS6Q7L5N1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC29.98■■■□□ 2.39
COPS6Q7L5N1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
COPS6Q7L5N1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC29.98■■■□□ 2.39
COPS6Q7L5N1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms