Protein–RNA interactions for Protein: Q6QNY0

BLOC1S3, Biogenesis of lysosome-related organelles complex 1 subunit 3, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3Q6QNY0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.54■■□□□ 1.2
BLOC1S3Q6QNY0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
BLOC1S3Q6QNY0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
BLOC1S3Q6QNY0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BLOC1S3Q6QNY0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.53■■□□□ 1.2
BLOC1S3Q6QNY0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
BLOC1S3Q6QNY0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BLOC1S3Q6QNY0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
BLOC1S3Q6QNY0 MIR6089-201ENST00000616698 64 ntBASIC22.53■■□□□ 1.2
BLOC1S3Q6QNY0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.53■■□□□ 1.2
BLOC1S3Q6QNY0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BLOC1S3Q6QNY0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
BLOC1S3Q6QNY0 AC012676.1-201ENST00000574705 1949 ntBASIC22.53■■□□□ 1.2
BLOC1S3Q6QNY0 AC004812.2-201ENST00000611079 2094 ntBASIC22.53■■□□□ 1.2
BLOC1S3Q6QNY0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BLOC1S3Q6QNY0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
BLOC1S3Q6QNY0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
BLOC1S3Q6QNY0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.52■■□□□ 1.2
BLOC1S3Q6QNY0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC22.52■■□□□ 1.2
BLOC1S3Q6QNY0 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
BLOC1S3Q6QNY0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BLOC1S3Q6QNY0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
BLOC1S3Q6QNY0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
BLOC1S3Q6QNY0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.51■■□□□ 1.19
BLOC1S3Q6QNY0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
BLOC1S3Q6QNY0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.51■■□□□ 1.19
BLOC1S3Q6QNY0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
BLOC1S3Q6QNY0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.51■■□□□ 1.19
BLOC1S3Q6QNY0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
BLOC1S3Q6QNY0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
BLOC1S3Q6QNY0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.51■■□□□ 1.19
BLOC1S3Q6QNY0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.51■■□□□ 1.19
BLOC1S3Q6QNY0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
BLOC1S3Q6QNY0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
BLOC1S3Q6QNY0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
BLOC1S3Q6QNY0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.51■■□□□ 1.19
BLOC1S3Q6QNY0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
BLOC1S3Q6QNY0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
BLOC1S3Q6QNY0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.5■■□□□ 1.19
BLOC1S3Q6QNY0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
BLOC1S3Q6QNY0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.5■■□□□ 1.19
BLOC1S3Q6QNY0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
BLOC1S3Q6QNY0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
BLOC1S3Q6QNY0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.5■■□□□ 1.19
BLOC1S3Q6QNY0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
BLOC1S3Q6QNY0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.49■■□□□ 1.19
BLOC1S3Q6QNY0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
BLOC1S3Q6QNY0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
BLOC1S3Q6QNY0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.49■■□□□ 1.19
BLOC1S3Q6QNY0 MIR3960-201ENST00000583311 91 ntBASIC22.49■■□□□ 1.19
BLOC1S3Q6QNY0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.49■■□□□ 1.19
BLOC1S3Q6QNY0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.49■■□□□ 1.19
BLOC1S3Q6QNY0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
BLOC1S3Q6QNY0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
BLOC1S3Q6QNY0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.49■■□□□ 1.19
BLOC1S3Q6QNY0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
BLOC1S3Q6QNY0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
BLOC1S3Q6QNY0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.48■■□□□ 1.19
BLOC1S3Q6QNY0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.48■■□□□ 1.19
BLOC1S3Q6QNY0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
BLOC1S3Q6QNY0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
BLOC1S3Q6QNY0 AC068473.5-201ENST00000616428 2072 ntBASIC22.47■■□□□ 1.19
BLOC1S3Q6QNY0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
BLOC1S3Q6QNY0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
BLOC1S3Q6QNY0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
BLOC1S3Q6QNY0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
BLOC1S3Q6QNY0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
BLOC1S3Q6QNY0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
BLOC1S3Q6QNY0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
BLOC1S3Q6QNY0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
BLOC1S3Q6QNY0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
BLOC1S3Q6QNY0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
BLOC1S3Q6QNY0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
BLOC1S3Q6QNY0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
BLOC1S3Q6QNY0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.46■■□□□ 1.19
BLOC1S3Q6QNY0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.46■■□□□ 1.19
BLOC1S3Q6QNY0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
BLOC1S3Q6QNY0 ABHD17AP4-201ENST00000411545 909 ntBASIC22.45■■□□□ 1.18
BLOC1S3Q6QNY0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
BLOC1S3Q6QNY0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
BLOC1S3Q6QNY0 AC016575.1-201ENST00000607026 382 ntBASIC22.45■■□□□ 1.18
BLOC1S3Q6QNY0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
BLOC1S3Q6QNY0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
BLOC1S3Q6QNY0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.45■■□□□ 1.18
BLOC1S3Q6QNY0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.44■■□□□ 1.18
BLOC1S3Q6QNY0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.44■■□□□ 1.18
BLOC1S3Q6QNY0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
BLOC1S3Q6QNY0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
BLOC1S3Q6QNY0 AC060814.1-201ENST00000554326 538 ntBASIC22.44■■□□□ 1.18
BLOC1S3Q6QNY0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.44■■□□□ 1.18
BLOC1S3Q6QNY0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
BLOC1S3Q6QNY0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
BLOC1S3Q6QNY0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
BLOC1S3Q6QNY0 SMPD5-203ENST00000639008 1464 ntBASIC22.43■■□□□ 1.18
BLOC1S3Q6QNY0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
BLOC1S3Q6QNY0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
BLOC1S3Q6QNY0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
BLOC1S3Q6QNY0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.43■■□□□ 1.18
BLOC1S3Q6QNY0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
BLOC1S3Q6QNY0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms