Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.97■□□□□ 0.95
LRRK2Q5S007 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRRK2Q5S007 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRRK2Q5S007 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.97■□□□□ 0.95
LRRK2Q5S007 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRK2Q5S007 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.97■□□□□ 0.95
LRRK2Q5S007 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
LRRK2Q5S007 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRK2Q5S007 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRK2Q5S007 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRK2Q5S007 SRD5A1P1-201ENST00000442297 786 ntBASIC20.97■□□□□ 0.95
LRRK2Q5S007 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.97■□□□□ 0.95
LRRK2Q5S007 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.97■□□□□ 0.95
LRRK2Q5S007 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.97■□□□□ 0.95
LRRK2Q5S007 CA15P2-201ENST00000611168 834 ntBASIC20.97■□□□□ 0.95
LRRK2Q5S007 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRK2Q5S007 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
LRRK2Q5S007 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRK2Q5S007 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
LRRK2Q5S007 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.95■□□□□ 0.94
LRRK2Q5S007 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRK2Q5S007 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.95■□□□□ 0.94
LRRK2Q5S007 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.95■□□□□ 0.94
LRRK2Q5S007 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRK2Q5S007 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRK2Q5S007 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRK2Q5S007 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.95■□□□□ 0.94
LRRK2Q5S007 AF131216.4-201ENST00000638924 1588 ntBASIC20.94■□□□□ 0.94
LRRK2Q5S007 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRRK2Q5S007 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
LRRK2Q5S007 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRK2Q5S007 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
LRRK2Q5S007 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRK2Q5S007 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRK2Q5S007 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.94■□□□□ 0.94
LRRK2Q5S007 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.94■□□□□ 0.94
LRRK2Q5S007 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.94■□□□□ 0.94
LRRK2Q5S007 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRK2Q5S007 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRK2Q5S007 IRS3P-201ENST00000223076 1006 ntBASIC20.93■□□□□ 0.94
LRRK2Q5S007 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.93■□□□□ 0.94
LRRK2Q5S007 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRK2Q5S007 SLC47A1P1-202ENST00000449666 945 ntBASIC20.92■□□□□ 0.94
LRRK2Q5S007 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.92■□□□□ 0.94
LRRK2Q5S007 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.92■□□□□ 0.94
LRRK2Q5S007 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
LRRK2Q5S007 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.92■□□□□ 0.94
LRRK2Q5S007 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.91■□□□□ 0.94
LRRK2Q5S007 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LRRK2Q5S007 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRK2Q5S007 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LRRK2Q5S007 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.91■□□□□ 0.94
LRRK2Q5S007 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.91■□□□□ 0.94
LRRK2Q5S007 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRK2Q5S007 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRK2Q5S007 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.9■□□□□ 0.94
LRRK2Q5S007 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRK2Q5S007 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRK2Q5S007 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.89■□□□□ 0.94
LRRK2Q5S007 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
LRRK2Q5S007 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
LRRK2Q5S007 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRRK2Q5S007 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.89■□□□□ 0.93
LRRK2Q5S007 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRRK2Q5S007 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.89■□□□□ 0.93
LRRK2Q5S007 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
LRRK2Q5S007 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC20.89■□□□□ 0.93
LRRK2Q5S007 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LRRK2Q5S007 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.88■□□□□ 0.93
LRRK2Q5S007 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRK2Q5S007 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.88■□□□□ 0.93
LRRK2Q5S007 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRK2Q5S007 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.87■□□□□ 0.93
LRRK2Q5S007 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LRRK2Q5S007 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LRRK2Q5S007 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
LRRK2Q5S007 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LRRK2Q5S007 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRRK2Q5S007 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
LRRK2Q5S007 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
LRRK2Q5S007 SYT6-210ENST00000641643 1587 ntBASIC20.86■□□□□ 0.93
LRRK2Q5S007 AC027682.1-201ENST00000562846 899 ntBASIC20.85■□□□□ 0.93
LRRK2Q5S007 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRK2Q5S007 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.85■□□□□ 0.93
LRRK2Q5S007 SNX5-217ENST00000606557 1087 ntBASIC20.85■□□□□ 0.93
LRRK2Q5S007 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRK2Q5S007 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRK2Q5S007 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.84■□□□□ 0.93
LRRK2Q5S007 MIR4767-201ENST00000582827 78 ntBASIC20.84■□□□□ 0.93
LRRK2Q5S007 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.84■□□□□ 0.93
LRRK2Q5S007 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRK2Q5S007 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.83■□□□□ 0.93
LRRK2Q5S007 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRK2Q5S007 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.83■□□□□ 0.93
LRRK2Q5S007 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRRK2Q5S007 BX255925.1-201ENST00000566954 1854 ntBASIC20.83■□□□□ 0.92
LRRK2Q5S007 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRRK2Q5S007 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.82■□□□□ 0.92
LRRK2Q5S007 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRK2Q5S007 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms